Vicia villosa (hairy vetch): 131595563
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Entry
131595563 CDS
T09680
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131595563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131595563
Spliceosome [BR:
vvo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131595563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR75_1st
PRP4
Beta-prop_Aladin
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_Vps41
eIF2A
WD40_like
Motif
Other DBs
NCBI-GeneID:
131595563
NCBI-ProteinID:
XP_058723914
LinkDB
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Position
LG4:153842152..153846089
Genome browser
AA seq
574 aa
AA seq
DB search
MDVEMENSTLSVTGESSIPGSDVQEQNPVSSAQPTLPQPTQPVIPPVISPVVPPLAPIPV
VPSSLVRPLAPLPVRPPVIKPPVPQNGDVGSSDSESDGDDGDTRINKGTGEYEISEESRL
VRERQEKAMQDLMMRRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMA
KLDADGQLEKLTKALEDEEAATSAPKDEAEDDLQYPFYTEGSKSLLDARIDIAKYSLVRA
ALRIQRAQRRRDDPDEDVDAEMDWTLKQAANLNLEFSEIGDDRPLTGCSFSRDGKGLATC
SLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPVHNHLATASADRTAKYWNDQGSLLRT
FEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYNLAFHHDGS
LAASCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRK
KKSLYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSL
DVLGDGGYIVTVSHDRTIKLWSSGTTSEQAMDVD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggagatggaaaattcaacattgagtgttactggtgaatcatctatacctggc
tctgatgttcaagaacaaaaccctgtatcttctgctcaaccaactttgccccagccaact
caacctgttattccaccagttatttctcctgtcgtgcctcctcttgctccaattcctgtg
gttccttcctctcttgtgcggccgctggcaccactcccagtccggccaccggttattaaa
ccaccagtgccacaaaatggcgacgttgggtctagtgattctgagtcagatggtgatgat
ggagataccagaataaataagggtactggcgagtatgagatatcagaagagagtagactg
gtgagggagcgacaggagaaagcgatgcaagacctcatgatgagaagacgcgctgctgct
cttgctgttcccacgaatgacatggcagtgagggcccgtcttcgacatcttggtgagccg
attactctctttggcgagagggagatggagagacgggataggttgcggatgattatggcc
aagctggatgccgatggtcagctggagaagctaacgaaagctcttgaggatgaagaggcc
gcaacttctgctccaaaagatgaggctgaggatgatctgcagtatcctttttacactgaa
ggctcaaagtctctcctcgatgcaaggattgatattgctaaatattctttagtaagggct
gcattgcgtattcaacgtgcccagagaagaagagatgatccggatgaagatgtggacgcg
gagatggattggacattgaagcaggctgcaaatttgaatcttgaattcagtgaaatcgga
gatgatcgaccacttacaggttgctcgttctcccgggatggaaaagggcttgctacttgt
tctctaactggggcttccaagttgtggagcatgcctaatgtaaaaaaagtttctaccttc
aaggggcacaccgagcgtgctactgatgttgcttattctcctgtgcacaatcatttagct
actgcctctgccgaccggacagcaaagtattggaatgatcaaggatctcttttgagaaca
tttgagggtcatcttgatcgtcttgcacgcattgccttccatccatcagggaaatacttg
ggcactgctagctttgacaagacatggagattatgggacattgaaacaggagaggagctt
cttctacaagaaggccatagtagaagtgtatataatttagcttttcatcatgatggatcg
ttagccgcgtcttgtggactggatgctcttgctcgtgtatgggaccttcgaactggaaga
agtgttcttgcactagaaggtcatgtcaaaccggttcttggcgtcagtttttctcctaat
ggatatcatttagccactggtggtgaagataacacttgtcgcatttgggatttaaggaag
aagaaatccttgtacaccattcctgctcactctaatttaatatcgcaagtaaaattcgag
ccacaagagggttactttttggtaactgcatcgtatgacatgacagctaaggtttggtcg
ggccgggactttaagcctgtgaagacactatcagggcatgaagcaaaagttacttctctg
gatgtccttggagatggtgggtatatagttactgtctcccatgatcgcaccataaagctg
tggtctagcggcactactagtgagcaagctatggatgttgactaa
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