Vicia villosa (hairy vetch): 131596024
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Entry
131596024 CDS
T09680
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131596024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131596024
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
RNases
131596024
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
131596024
NCBI-ProteinID:
XP_058724556
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All DBs
Position
LG4:complement(174252776..174261776)
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AA seq
641 aa
AA seq
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MVIFLRFVYNYFPVEKNTHFVIHSNNNNHNHDGYLRRNLSNKLNSAAAPLLRDSLPASNH
RHFQITASAKMESSKNQYESLSSIDEDDSNKCTDFYDIYGPEAKAEVVFKSPEEDRSTLN
LADVQGLVTWVLGEGFMPSWVFIKNKPLIHKVVMLYMPALDAALYLSLSRSLPNLKKSCG
KPRPVLALSCISDNMQTIDALLTCRQKRKRDLNASIILKSTQTSQQEEGCSATLNLSFTE
LTKDIPFPVTYYTLTEKDLEENGYPINKPDFLSTLPAPPGSPFHEMVAVDCEMCITGEGF
ELTRVTLVDVKGQVLLDKLVKPSNPITDYNTRFSGITAEMLDGVTTSLTDIQKEFQKLVY
QETILVGHSLENDLLALKISHDLIIDTAVLYKHPRGSSHKSALRFLTKRFLSREIQQSGN
GHDSIEDARATLELAVLKIRNGPDFGAPPSLMRKKLLSILSESGKNSSVIDDISIVKRFA
SESSNAIPVTSDEEALAKTIQELKNEKVHFIWTQFSELHSYLKKQAEDSDSLNKKIAEMI
ALHTCQKSNSNGKGLKPNISSELKEIVTRMDNKIHKLYKSLPTNAMMIVCTGHGDTAVVR
RLRKMLEEEGESNFGREKILESLQEFQARAEVALCFVGVKH
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtaatttttctgcgtttcgtatataattattttccagtcgaaaaaaacacccatttc
gttattcacagtaacaataacaaccataaccatgacggctacctccgccgaaacctctct
aacaaactaaactccgccgcagctcctcttctccgcgactcacttccggcgtccaaccac
cgtcacttccagataacagcttccgcaaaaatggaatcctcgaagaatcaatacgaatcc
ctctcttccattgatgaagacgattctaacaaatgcaccgatttctacgatatctatggt
cctgaggctaaagcagaagttgttttcaagtcaccagaagaagatagatcaactctgaat
ctcgctgatgttcaaggacttgtaacttgggttctcggcgaaggtttcatgccatcttgg
gtttttatcaagaataaacctcttattcacaaagtggttatgctctatatgcccgccctg
gatgcagctttgtacttgtcactgtccagatcgcttcctaatttaaaaaagtcgtgtggc
aaaccacgaccggtccttgctctcagctgtatatcagataatatgcagacaatagacgca
ctactaacatgcaggcagaaaagaaaaagggatctaaatgcttcaattattctaaaatct
actcagacatcacaacaagaagaaggctgtagtgctaccctcaatctatcattcacggag
cttactaaagacatacctttccctgttacatactatacactaacagagaaagatctggaa
gagaatggatatcctattaataaaccagattttctttctactcttcccgctcctccgggg
tctccttttcatgagatggtagcagttgactgtgagatgtgcataacaggtgaggggttt
gagctgacgagagttactctcgtggatgtcaaaggacaggttttgttagataaattggtt
aaaccttcaaatcctatcaccgattacaatacacgatttagtggaataactgctgagatg
ttagatggggtgacaacaagtctgacagacattcagaaagagtttcagaaactggtttac
caagaaactattcttgttgggcattctttggaaaatgatttattagcattgaagatatca
catgatttgatcattgacacggcagtattatacaaacaccctcgagggtcttcccataaa
tctgctcttcggtttcttactaaaagatttctttcaagagagatacaacaatcagggaat
ggacatgacagcattgaagatgctagagctaccttggaattggcagtattgaagatcaga
aatgggcctgactttggtgctcctccatcccttatgcggaaaaagctcctttccattttg
agtgagtctggcaaaaattcttcagtgattgatgatatatccattgtaaaacgatttgcc
tcggagtcctctaatgcaattccagtgacatctgatgaagaagcacttgcaaaaaccatc
caggagttgaagaatgaaaaggtgcattttatctggactcagttttcagagttacactca
tacttgaagaaacaagctgaggattcagatagcttgaataaaaaaattgcagagatgatt
gcattacatacatgtcagaagagtaattcaaatgggaaaggcctcaagccgaatatatct
tctgaactgaaggaaattgttactcgcatggataataaaattcataaactgtataagtca
ttaccaacaaatgctatgatgatagtttgcaccggtcatggagacacagcagttgttcgc
aggttgaggaaaatgcttgaggaggagggtgaaagtaattttggtcgtgagaagattttg
gaaagcttgcaagagtttcaagctagagctgaagtagccttgtgttttgtaggtgtaaaa
cactga
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