Vicia villosa (hairy vetch): 131596114
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Entry
131596114 CDS
T09680
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131596114
Transcription machinery [BR:
vvo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131596114
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
C-C_Bond_Lyase
Sigma70_r4_2
DUF2550
Motif
Other DBs
NCBI-GeneID:
131596114
NCBI-ProteinID:
XP_058724669
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Position
LG4:complement(177520978..177523971)
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AA seq
553 aa
AA seq
DB search
MGLSFGFRLNPKLTPPIHSPHFFTNASFFLSSSSSPVGGRETLFNPVRLSLLSTIYEEGE
TLHKDFGKTFAFSSSALEAPEKDLLLGGDVTSKVNKGKRSLSGVREMVDNTKLPHGESHF
GMLMENLDVLEETFADSEALRLKKNIILQIEKLGALELFNVCLTTSFGTSRVSSCIDGVL
EQVEENKRNRKVDVYTGKVIVHSSKRKESRTRRKGLSVSIASSSKSLRLEDNTQEDTLRS
SPEASFVRKTSNTKNRRAAIAQREMEMSEGVKVLAKLEKMRTALEEDTKEVVSLRSWAEA
SGVEERVLQRQLYHGYYCKDELIRSTRSLVLYVAKKYRGMGIALEDLLQVGYIGVLQGAE
RFDSTKGYRFSTYVQYWIRRAMSRMVTKYARGITVPWSMNKAISQIQKARKVMKSTSMKN
ADDHEISKMTGLSLDKIRSANHCLRVVSSMNLHRNIDYFAQMADKSIESPEVTVMKQHIR
KDIYEILQSLDSRERQIIILRFGLNDHQPKSLEYIGKIFKVTKEWIRKLEKQALTKLRNE
TNISKLNYYLDLQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcttttggctttagattaaaccctaaactcactcctcctattcactctcct
catttcttcaccaatgcatctttcttcctctcttcttcatcttctcctgttggaggtaga
gaaactttatttaaccctgtgaggttatctttgctttcgacgatttatgaggaaggggaa
actttgcacaaggatttcggaaagacatttgcgttttcttcatcagcattggaagctccg
gagaaagatttattgctaggaggagatgtgacatctaaggtaaataaaggaaagaggtcg
cttagtggcgtgcgtgaaatggttgataacacaaaactgcctcatggggagtcgcatttc
ggtatgttaatggagaatcttgatgttttagaagaaacttttgctgattccgaagcgttg
aggttgaagaagaatattatattgcaaatagaaaagctcggagctcttgagttgttcaat
gtttgtcttacaacatctttcggaacctcacgtgtatcgagttgcattgacggagttctt
gaacaagttgaagagaataaaagaaaccgtaaagtagatgtttatacaggtaaagttatt
gttcattctagcaagaggaaggaaagtagaacaagaagaaagggattatctgtttccatt
gcttcttcgtctaagtcgttgcggttagaagataatactcaagaagatacgttacgttct
tcaccggaggcttcttttgtaagaaaaacatcaaatactaaaaatagaagagcggcgatt
gctcaaagggaaatggaaatgtcagaaggtgtaaaggttttagcaaagttagagaaaatg
agaacagcattagaagaggatacaaaggaagtggtaagcttgagaagctgggcggaagcg
tctggagttgaggagagggtgctacaacgacaactgtatcatggctattattgtaaagac
gagttgatacggagtactcgttcgttagttctatacgttgccaaaaaatacagaggtatg
ggaatagctttagaagatttacttcaggtagggtatataggtgttctccaaggagccgag
cgatttgacagtacaaaagggtaccgattctcaacctatgtgcaatactggataaggaga
gcaatgtcaagaatggtcacaaaatatgctcgaggaatcaccgttccttggtcaatgaac
aaggcgataagtcagatccagaaagctcgaaaagtcatgaaaagtacatccatgaaaaat
gcagacgatcacgaaatttcaaagatgacaggtctttcactggataaaatccgatcagct
aaccattgtctgagagtagtttcttcaatgaatctgcatcgcaatatagattattttgct
caaatggccgataagtcgatagagagtcctgaagtgaccgtcatgaagcaacacattaga
aaagacatatatgaaatccttcaaagcttggattcaagggaaagacaaataataatccta
cgattcggccttaacgatcaccaacccaagtcgcttgagtatataggaaagattttcaaa
gttaccaaagaatggataaggaaattagagaaacaagctctcacaaaactaaggaatgaa
acaaacatatcaaagttgaattactatttggatctgcagtag
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