Vicia villosa (hairy vetch): 131596470
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Entry
131596470 CDS
T09680
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131596470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131596470
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131596470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_Gbeta
WDR90_beta-prop_4th
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RSE1_2nd
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_2nd
WD40_MABP1-WDR62_1st
WD40_2
PQQ_2
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
131596470
NCBI-ProteinID:
XP_058725108
LinkDB
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Position
LG4:190001438..190007611
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AA seq
809 aa
AA seq
DB search
MDKIKVKYQLKNEDWKPSPITALATSIDGSRVAASREDGSLELWLVSPNTIGWHCQLTIH
GDPNRIVSSLVWCPGGEKEFPHGRLFSSNIDGSVSFWDLCHLKQTMVLESNGVSIWQMAV
ALSKSDDGETNGVHMENGFSKRFLNGFDDHEDSESDEDSDSDSPEVLKQSSLEGPRVAVA
FDDGCVRIFTISDTNEFIYLKSLTRVTGRVLSVAWSDDAKFIFSGSSDGIIRIWNAKSGL
EAHRIPARLGGDSGHELCIWSLLYLRSGTLVSGDSSGSVQFWDCQLGVPSQEPITRHKGD
VHALAAAPNHNMVFSAGSDGKVVLYKLSSSTMEKENWVYVDYKKGHSHDVRALTVAVPIS
QEDSWPVENKKSRYEVKPDDSSYRKWAHSGHPMLISAGDDTKLYAYAVKEFTGFKPHCIC
PVPQRTPIQVALNTSFNQAPMLLLQSSHWIEVRLLHLKNVRRTGDYAKAESVGRFKIKAS
RKIICSALANSGVFLAYSDNEKPILYKVERSEAGKMTWSFGKRKLPERLPTAHSMIFSHD
SSWLIIAGLDRRIYVVDANSSELVHTFTPFRESRDDGLSPAEPPITKLCTSSDRQWLAAV
NCFGDIYVFNLETLRQHWFISRLDGASVTAAGFPPQNSNVLIVTTSSNQVYAFDVEARQL
GEWSVRNTFVLPKRFHEFPGEVIGLSFPPSSTSSSVMVYSSRAMCLIDFGLPVNQDEGEK
LHTQDSIVKSSPKINGKKRTKFRKNFDNVEVLPLEKKNFDNFEVLPLEKDRVLYLSHISN
SLFFMIEKPWSDVVNSLEVQPVHRHIYGT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcaaggtcaagtaccagctcaaaaacgaagactggaaaccctcaccaatc
acagctctcgccactagtatcgacggttcacgagtcgccgcttcacgtgaggacggttcc
ttggagctttggctcgtttctcctaatactataggctggcactgtcaattgactattcat
ggtgatcctaataggattgtgtcgtcgctagtttggtgtcctggcggggagaaagagttt
ccgcatggacgtttgttttcttctaatattgatggctctgtttcgttttgggatctttgt
cacttgaagcaaacgatggtgcttgaatctaatggtgtctcaatctggcaaatggctgtg
gctctgtctaaaagtgatgatggcgaaaccaatggtgttcacatggaaaatggtttttca
aagagatttcttaatggttttgatgatcacgaggacagtgaaagtgatgaagattccgat
tctgattcacctgaagttctaaagcaatccagtttagagggtccaagagtagcggttgcc
tttgatgatggatgtgttagaattttcactatttctgatacaaatgagtttatatactta
aaatccttgacccgggtcacaggacgggttttaagtgtggcttggagcgacgatgctaaa
ttcatattttcaggaagtagtgatgggataatacgtatctggaatgccaaatcaggtctt
gaagcccataggattccagctagactgggtggtgacagtggacatgaactttgtatatgg
tcactactgtatttaaggtctgggacacttgttagtggagacagcagtgggagcgtccag
ttttgggactgccaactaggagtgccttctcaagaacctattactcgtcacaagggagat
gttcatgctctggcagcagcacctaatcacaatatggtgttctcggctggttctgatgga
aaggtggttctttataaactatcttcatcaaccatggagaaagagaattgggtttacgtt
gattataaaaaaggtcattcacatgatgtccgagccttgactgttgctgtgccaattagc
caagaagattcttggcctgttgaaaacaaaaaatctcgttatgaagtaaagccagatgat
tctagttaccgcaaatgggctcattctgggcatcccatgcttatctcagccggggatgac
acaaaactctatgcatatgctgttaaagaattcaccgggtttaaaccacattgtatctgt
cctgtgcctcagagaacaccaattcaagtagcacttaatacttccttcaatcaagcacca
atgcttttactgcagtcttcacattggatagaagtccgcttgctacatctcaaaaatgtt
cgcagaactggagattatgcaaaggctgaaagtgttggccgattcaagattaaggcatct
cgtaagataatttgtagtgcccttgctaactcaggggtgtttttagcgtattctgataat
gaaaagcctattctttataaagtagagagatccgaagcaggaaaaatgacatggagtttt
ggtaaaaggaagcttcccgagagattaccaactgcccattcaatgattttttctcacgac
tcttcttggttgataatagcgggccttgatagaaggatatatgttgtggatgccaatagc
tcggaactggtacatacttttacaccatttcgtgagtcacgagatgatggattatcacca
gccgaaccacccatcacaaaattgtgtactagttctgatagacagtggttggccgctgtc
aattgctttggggatatatatgtatttaacttggaaacactaaggcagcactggttcatt
tcgagattagatggcgcctctgttacagctgctggatttccacctcagaacagcaatgta
ctgatagttacaacttcttcaaatcaagtgtatgcattcgatgtagaggccagacaattg
ggggaatggtcggtgcgaaatacatttgttcttcccaagagatttcacgagtttccgggt
gaagtcatcggactttcattccctccctcgtcaacttcatcttcagtaatggtctatagc
tccagagcgatgtgtttgattgactttggcttgcccgtgaatcaagatgaaggggaaaag
ttacatactcaagattcaatagtcaagagttcaccaaaaataaacggtaagaaaaggact
aaatttaggaagaactttgataacgtcgaagttttgccattagaaaagaagaactttgat
aacttcgaagttttgccattagaaaaggatagagtcttatacctatcgcatatttcaaat
agtctcttctttatgattgaaaaaccatggtctgatgtagtcaatagcttagaagttcaa
cctgtccacagacatatttatgggacatag
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