Vicia villosa (hairy vetch): 131596654
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Entry
131596654 CDS
T09680
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131596654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131596654
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
RNases
131596654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEDDh_C
PolyA_pol
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
131596654
NCBI-ProteinID:
XP_058725360
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All DBs
Position
LG4:195615936..195621372
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AA seq
557 aa
AA seq
DB search
MDNKLDTAEKKVLVDIVKLVQKRGMKGKLGGWKEFLNVHDKKFGAGKSDPSKRSHEDLAE
FLKTFSSDEDLKYFDNILRHHSNQYTVERLKDRSHDSPEQSLVQATIQHPRYPMDYSFPS
IDEGWLVITLKKKAKGIKSTTMLAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHELVKPE
KAITDYRTEITGVSSKDLETVTRSLADIQKSLKKLLYSGAILVGHSLNNDLGVLKLDYPR
VVDTAYIFQPMDGSTYRSPSLNSLCQAVLGHGVRKKGATHNCQDDACATMKLVLAKIKHG
VDKPFPLTLVQEPVPESEMSKLLIHRIPTTVNSETLHKIVPGDFTIELKPTRNGQVDKYS
ALAIFKNPREAREAYENVQGSQEKDSNGRLQKLVKCPGTNAGVYVRTMGVDDNRKKRDLQ
EDETLDTSKNKKIKMDPEVEKDDALKPLQVKHELEKKAHLKQIEALKQRLKESESEHLKE
IDALNKRLKESELEIESMKEQLVSQRSKESELEIESMKEQLRKKDFEINTLHKMIDNIRK
KPKPPRQSIKEQMDDTC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggataacaagcttgacacagcggagaagaaggtgctggttgatattgtaaaattggta
caaaaaagaggcatgaagggtaaacttggaggctggaaggaattcttgaacgttcatgat
aagaaatttggggcaggtaagagtgatccatccaagaggtcccatgaggatttggctgaa
tttctaaagacattctcaagtgatgaggatttaaagtattttgataacatcttgcggcat
cattcaaatcaatacacggtagagcgactgaaagatagatctcatgattccccagagcag
agtttagtccaagcaactattcagcacccgaggtacccaatggattactcattcccatct
attgacgagggatggttagtgataacccttaaaaaaaaggccaaggggataaaatctact
acaatgcttgctgttgattgtgaaatggttctttgcgaagatggaactgaagctttagtc
aaagtttgtgttgtagatcacaatttagaggtcaaactacacgaacttgttaaaccggag
aaagcaatcacagactacagaacagagattaccggtgtctcttctaaagatctagagaca
gtgactcgctccttagctgatatacaaaaatcgttgaagaagctgttatacagtggagcc
atattagtgggacacagtttaaataatgatctaggtgtgctgaagctagattatcctaga
gtggttgacactgcatacatcttccaacccatggatggatctacttacaggagtccttct
ttaaatagtttgtgtcaggctgtgttaggccacggagttcggaaaaagggtgctacacat
aattgtcaagatgatgcatgtgcaacaatgaaacttgttcttgcaaagatcaaacatggt
gttgataagccatttccattaacattggttcaagagcctgttccagaaagtgagatgtcg
aagctgcttattcacagaataccaaccactgtgaacagtgaaacactacacaaaattgtt
cctggagacttcacaatagaactaaagcctaccaggaatggtcaagtagacaagtattct
gccttagctatctttaagaacccaagagaggcacgtgaggcatatgaaaatgtccaaggc
agccaagaaaaggattcaaatgggcgtctacagaaacttgtaaaatgtccgggtacaaat
gccggtgtatatgttcggacaatgggagttgatgataaccgcaaaaagagagatttacaa
gaggatgagacacttgacacatccaagaacaagaaaataaaaatggatcctgaagttgaa
aaggatgatgccctgaaacctttacaagtgaaacatgaacttgaaaagaaggcccatttg
aaacagattgaagcactgaaacaacgtttaaaagaaagtgaatcggagcacttgaaggag
attgacgcattgaataaacggttgaaagaaagtgaattggagattgaatcaatgaaggaa
caattggtgagtcaacgatcaaaggaaagtgagttggagattgaatcaatgaaggagcag
ttgaggaaaaaggactttgaaatcaacactctgcataaaatgatagataacattagaaaa
aagccaaaaccaccaagacaatctattaaggaacaaatggatgatacatgttaa
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