Vicia villosa (hairy vetch): 131598813
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Entry
131598813 CDS
T09680
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131598813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131598813
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131598813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_16
TPR_CcmH_CycH
ANAPC16
TPR_2
Motif
Other DBs
NCBI-GeneID:
131598813
NCBI-ProteinID:
XP_058727358
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Position
LG4:complement(11360769..11366259)
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AA seq
719 aa
AA seq
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MEKTTLTDKYSIESAETLANQAQGLPIAEATPIYEQLLQLFPTAAKFWKQYVEAHMAVNN
DDAIKQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGTEGQEETKKAFDFMLNYVGADISS
GPVWMEYISFLRSLPSVHPQEETHRMTVIRRVYQRAIINPTHQIEQLWKDYENFENSVSR
QLAKGLISEFQPRYNSARAVYRERKKYFDEIDWNMLAVPPTGSSKEEMQWMAWKRLLSFE
KGNPQRIDAASSNKRIVFTYEQCLMYMYHYPDIWYDYATWHAKCGSIDAAIKVFQRSLKA
LPDSEMLRYAYAELEESRGAIQAAKKIHENLLGDGENATALAHIQFIRFLRRTEGVEAAR
KYFLDARKSPTCSYHVYVAYASVAFCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFLT
RLNDDQNIRALFERALSSLPPEKSVEVWKRFVQFEQTYGDLSSMLKVEQRRKEAFGEDAT
TASESSLQDVVSRYSFMDLWPCSSNDLDHLSRQEWLAKNLNKKDEKSIVLNGSTLTDKGS
IANISNTSSKVVYPDTSKMLIYDPKQNPSTGASTNAFDEILKATPPALVAFLANLPTVDG
PTPNVDIVLSICLQNDLPIGQSGKTGGPAPATSELSGSSKSHPVQSGLSHKPIGRKHYGK
RKELDRQEDDDTTSVQSQPPPRDAFRIRQFQKARANSTSQTGSVSYGSALSGDLSGSTG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaccacactcactgataaatacagcattgaatccgctgaaactttggcaaac
caagctcagggtttgcctattgcggaagccacgcctatatacgagcagcttctgcagtta
tttccaacagctgccaagttttggaagcagtatgtggaggcacacatggctgtaaataat
gatgacgctatcaaacagatttttagtcgatgtttgttgaactgtcttcaagttcctctc
tggcgatgttacattcgtttcattagaaaggttaatgacaagaaggggacagaaggtcaa
gaagagactaaaaaagcttttgactttatgctcaactatgtcggagcagacatatcatct
ggccctgtatggatggaatacatatcctttctaagatcattgccgtctgtgcacccacaa
gaagaaacacatcggatgactgttattcgaagagtctatcagagggctattattaatccg
actcatcaaattgaacaactttggaaagactatgaaaattttgaaaattctgtcagtcgt
cagttggctaaaggactgatatccgagtttcaaccaaggtataatagtgcgagggcagtt
taccgggaacggaaaaagtattttgatgaaattgattggaatatgcttgccgtaccaccc
actggatcctcaaaggaagaaatgcagtggatggcatggaaaagacttctatcttttgaa
aaaggaaatccacaaagaatagacgccgcttcctccaacaaacgaattgtatttacttac
gagcagtgtctgatgtatatgtaccattatcctgatatatggtacgactatgctacatgg
cacgctaaatgtggctcgatagatgctgcaattaaagtgtttcaaagatctctgaaggct
cttcctgattcggaaatgctacgatatgcttacgcagagctagaagaatcccgtggagca
atccaggctgcaaagaaaatacacgaaaaccttttgggagatggtgaaaatgcaacggca
cttgcacatattcaattcattcgttttctaagaagaactgaaggtgttgaagctgcaagg
aaatactttctggatgctcgcaaatccccgacttgttcatatcatgtttacgttgcttat
gcgtccgtggctttctgtcttgacaaggatcctaagatggctcataacgtctttgaagcc
ggattaaaacgctttatgcatgagccggtctatattctcgaatacgccgatttcttgaca
cgtttgaatgatgaccaaaatatacgtgctttatttgagagggcattgagttcacttcct
ccagagaaatcggttgaggtttggaaaaggttcgttcaatttgagcaaacttacggtgat
ctttccagcatgctcaaggttgagcaaagaagaaaagaagcgtttggcgaagatgcaacg
acagcatcagagagttctctgcaagatgttgtatcacgttatagtttcatggatctatgg
ccgtgctcttctaatgatcttgaccatttatccagacaagagtggcttgccaaaaatctc
aataagaaagacgagaagtctattgttctgaatggctcgactcttacagataagggatct
attgcaaacatttcgaatacatcgtcaaaggttgtctatcccgatacttcgaagatgttg
atatacgatccaaagcagaatccgagtacaggtgctagcacaaatgcattcgatgaaatt
cttaaagctacgccgcctgctttggttgcatttttagcaaacctacccacagtcgacggt
ccaactccaaatgtggatatcgtgctatcgatttgtttgcagaacgaccttccaatcgga
caaagtggtaaaaccgggggtcctgctcctgctacaagtgaactttccggttcaagcaag
tctcaccctgttcagagtggtttgtcgcataaaccaatcggtcgaaagcattatgggaaa
agaaaagaattagacagacaagaagatgatgatactacatctgttcaaagccaaccacct
cctcgtgacgcttttcgtataagacagttccagaaagctcgagcaaacagtacatcacag
accggatcagtttcatatggaagtgcactctctggtgatttatccggcagcaccggttga
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