Vicia villosa (hairy vetch): 131599426
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Entry
131599426 CDS
T09680
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131599426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131599426
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131599426
SSDB
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Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
131599426
NCBI-ProteinID:
XP_058727761
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Position
LG4:105605018..105607245
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AA seq
207 aa
AA seq
DB search
MGADHGENGGSDDSEKVEVNIYPLNSYYFGSKHAIPFKDQDRLQRFKSNYADRGMRINVE
AALMVELFKHPHLLLLQIKNSIYKLPGGRLRPGESDTDGLKRKLAKKLSADEDEAQWEVG
ECLGMWWRPDFETLMQPFLPPNVQHPKECTKLFLVKLPETRRFTVPKNMKLLSVPLCQIH
ENHKIYGPIISSVPQLLSKFSFNMIGI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagaccatggtgaaaacggaggaagcgatgattctgagaaggtggaagtgaac
atatatcctttgaattcttactattttggatccaaacatgccattcctttcaaagatcaa
gaccgtcttcaaagattcaaatccaattatgctgaccgtggaatgcgaattaatgttgaa
gctgctctaatggttgagttgttcaaacatccgcatttgttgctgttgcaaataaaaaat
tccatctataaacttcccggtggccgtttgaggccaggtgaatcagatactgatggattg
aagcgtaagctggcaaagaagctttctgctgatgaagatgaggcacaatgggaggtagga
gagtgccttggaatgtggtggaggcctgattttgaaacattgatgcaacctttcttacca
cctaatgtccaacatccaaaggagtgtacaaaactcttccttgtaaagcttccggaaact
cgaaggttcacagtgccaaagaacatgaagttgctttcggttccattgtgccaaattcat
gaaaatcacaagatatatgggccaattatatcttcagtcccacagctactctcaaaattc
tctttcaacatgatcggaatttaa
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