KEGG   Vicia villosa (hairy vetch): 131599829
Entry
131599829         CDS       T09680                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03020  RNA polymerase
vvo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131599829
  09124 Replication and repair
   03420 Nucleotide excision repair
    131599829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvo03021]
    131599829
   03400 DNA repair and recombination proteins [BR:vvo03400]
    131599829
Transcription machinery [BR:vvo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131599829
DNA repair and recombination proteins [BR:vvo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131599829
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 131599829
NCBI-ProteinID: XP_058728069
LinkDB
Position
LG4:complement(143545396..143548864)
AA seq 207 aa
MSDKGGKAGSLLSKGSLKGKDDSATKSAKARKVQFAKEGPFESVLNGQKSGGKADFGRGK
GDKFANGGKSSAAKDPHQFEHRVDQELPDNIKCLMDCEAAVLLQGIQDRMVSLSRDPAMK
MPASFDKGLHYAKSSNKHSNPEFARLTLEPLLNHGLTESEICVISNAYPETADEVFALLP
SLKGKRGINSLPIEESLSELAKFKQTM
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtctgacaaaggaggaaaggctggttctctcttaagcaaaggatccctaaaggggaaa
gacgatagtgcaacaaaatcagcaaaggcaaggaaggttcagtttgccaaagaaggtcca
tttgaatctgtactaaacggtcaaaaatctggtggaaaagctgattttggtagaggaaaa
ggagataagtttgcaaatggtggaaagagttctgcagcaaaagacccacatcaatttgaa
catagagttgatcaagaacttcctgacaatatcaaatgcctgatggactgcgaggctgca
gttttgttacaaggaattcaagatcgtatggtttcgttatctagagatccagctatgaaa
atgcctgcatcatttgacaagggactacactatgccaaaagcagcaacaagcattcaaac
cctgagtttgctagactcactcttgagcctctactgaatcatggtctcactgagagcgag
atatgtgtgatttctaatgcatacccagaaaccgctgatgaagtttttgctctcctccca
tcacttaagggtaagagaggcattaacagcctacctatcgaagaatcgttgagtgagctt
gctaagtttaaacagactatgtaa

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