Vicia villosa (hairy vetch): 131599996
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Entry
131599996 CDS
T09680
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131599996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131599996
Enzymes [BR:
vvo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131599996
DNA repair and recombination proteins [BR:
vvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131599996
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
HeH
Exo_endo_phos_2
FANC_SAP
Motif
Other DBs
NCBI-GeneID:
131599996
NCBI-ProteinID:
XP_058728210
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Position
LG4:complement(153852678..153857989)
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AA seq
523 aa
AA seq
DB search
MKQLRLLNLYQSLQFCSIPKHFTSKTLLSHPTLKPMASKTPFSSSSQPISNHHILKENGV
DSYSIEIERLRNDPTIVDTMTVPELRKTLKSIGVPAKGRKEDLLSALKTFMDNNMCEQDS
PTRDKQGLFISSENTSLEVKAKKVSDEEPVDDVNDTLEKVELNQGKKRLKQSESASKIVK
ATTKKKLLVKSDEVSDVKPSRGKRKVSSDVVSVVSQSDEISTTTTIQTETWTVLAHKKPQ
KDWIAYNPRTMRPPPLSRDTKFVKLLSWNVNGLRALLKLEGFSALQLAQREDFDVLCLQE
TKLQEKDIEEIKQRLLDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEG
RLVTVEFDTFYLITGYVPNSGDGLKRLSYRVTEWDPALSNYLKELEKSKPVVLTGDLNCA
HEEIDIYNPAGNKRSAGFTDEERKSFETNLLSKGFVDTFRRQHPGVVGYTYWGYRHGGRK
FNRGWRLDYFLVSESIADKVHDSYILPDVIGSDHCPIGLVMKL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactccgtctcttgaacctctatcaatctctccagttttgcagtattccgaag
catttcacttctaagaccttgctttctcatccaactctcaaaccaatggcctctaaaaca
cccttttcaagttcatcacaaccaatttctaaccatcatattcttaaggaaaatggtgtt
gatagctattccattgagattgaaagattaagaaatgaccctactatagtagacaccatg
actgttcccgaactccggaagacattaaagagtataggggttcctgccaaaggtcgtaaa
gaggatcttttgtctgccttgaagactttcatggacaataatatgtgtgaacaagattct
ccaactagagacaaacaagggctgtttatttcttctgaaaatacatctttagaagtgaaa
gctaaaaaggtatcggatgaagagcctgtggatgatgttaatgatactctagagaaagtt
gaacttaaccagggtaagaaaaggttaaaacaatcagaatccgcaagcaaaattgtcaaa
gcgacgaccaaaaagaagctgttggttaaatcagacgaggtttcagatgttaagccttcc
agggggaagagaaaagtatcttcagatgttgttagcgttgtatcacaatcggatgaaatc
agtacaacaaccactattcaaactgaaacatggactgttcttgctcacaagaaacctcaa
aaggattggattgcgtataatcctagaactatgagacccccgcctctttctcgggataca
aagtttgtcaagcttttgtcttggaatgtcaatggattgagagcattgctaaaattagag
ggattctcagcacttcaacttgcccaaagggaagacttcgatgtattgtgcttgcaagaa
actaaactacaggagaaggatatcgaggaaataaaacagcgactgctagatggctatgag
aacagcttttggacatgcagtgtttctaagcttggttattctggaacagcaataatctca
aggataaagcctctttcagttagatatggcctaggtatatctgatcatgatagtgagggt
agacttgtgactgtagagtttgatacattttatctgataactggatatgtgcctaattct
ggagatggcttgaaaagactgtcttacagagtgaccgaatgggatccagctctcagcaat
tatttgaaagagctggaaaagtcaaaacctgtagttttgacaggtgatctgaattgtgct
catgaagagatagacatatacaaccctgctggtaacaaaaggagtgctgggttcacagat
gaagagaggaaatcatttgaaacaaatttgttgtcaaagggatttgtagataccttcaga
aggcagcatcctggtgttgttggatatacttattggggttatcggcatggtggccgcaag
tttaacagaggatggcgtcttgattatttccttgtctcagaatccatagcggacaaagtt
catgattcctatattctccctgatgtcattggcagcgatcattgtccaatcggcctcgtt
atgaagctttga
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