Vicia villosa (hairy vetch): 131601103
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Entry
131601103 CDS
T09680
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131601103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131601103
Enzymes [BR:
vvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131601103
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131601103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
131601103
NCBI-ProteinID:
XP_058728824
LinkDB
All DBs
Position
LG5:1487045..1500110
Genome browser
AA seq
1179 aa
AA seq
DB search
MATPKPGSPDDLNLDELRELFNPHIESFDHLIDAGLQTIFRSISLKAFSVTHPSTSKKLI
ITFENPVLHPPQKPGMSSSSRQALYPFECRQAKLTYSGRLTATVCLQYEGSHAIVRDSFM
FGQFPIMLKSKRCNLRGASPRKLVSLKEEASEMGGYFIVNGLERYIRPIILPKRNYPMST
VRSSFSEKREGYTDKAVVIRCVRADQTSLTVKLYYLRNGSARLGFWIQGREYMLPVGILL
KALIDTTDREIYVNLTSCYNKKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQY
LGEHFQPIFPELRNESHYTVANAVLKDFILVHLDDNFDKFNLLIFMLQKLFSLIDQTSVP
DNPDSLQNQEVLLPGHLISLYLKAKLEEWLEKGKTMLLDEIDKKGEKFNFEDFIQVKRVL
AKNHASAVGKAIESMLTSGRLATQSSLDLPQVSGYTLQAERLNYLRFLSHFRAVHRGALF
AGLRTTTVRKLLPESWGFLCPVHTPDGGPCGLLNHMTRTCRITSFYDSKGNIKDYFKIKL
SILNILIDIGMTQALPKIFLPGPPEVLTVLLDGCIVGFIPSAEVEKVVAHIRKLKVSSAA
VIPNDLEVGYVPLSMGGAYPGLYLFTSPARFVRPVRNISIPSNGNENIELIGPFEQVYME
IRCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS
SQTIQHRADQKLYHLQTPQSPLVRTSAYTEYNIDEYPSGTNAIVAVLAYTGYDMEDAMIL
NKSSVERGMFHGQIYQTETIDLAGQGPVAERSSRVFRKSNLEKTSCPSIGSDGLPHVGQM
IHPDEPYCSSYNEVTNKTFVFKKKGTEPAYIDYVAVDTKNKKHIRKANIRFRYPRNPVIG
DKFSSRHGQKGVCSQLWPDIDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGS
LHGKFKDATPFRSSVESGSKSASVVDELGDMLKEKGFNYHGCEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLL
HDRLHTGSDYHIADVCSICGSMLSTTFIQAQKPTVREIGGLPPRRAPSKVTCHACQTSKG
METVAMPYIFRYLAAELAAMNIKMTLKLNHGANHSDTSV
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccaaaaccgggttcacccgacgacttgaacttggacgaactgcgagagctt
ttcaaccctcacatagagtcctttgaccatttgattgatgctggcttacaaaccattttc
agaagcatcagtctcaaagctttctcggtcactcatccttcaacatcaaaaaagcttatc
attacgtttgaaaatccggttcttcatccgcctcagaagcctggaatgtcgagttcatca
cggcaggcgttgtatccgtttgagtgcagacaggcaaaactcacatattcagggcggtta
acggcaactgtctgtcttcaatatgagggcagtcatgctattgtacgagacagttttatg
tttggccagtttcccataatgctaaagtctaagcgatgcaacttgagaggtgcttctccc
cggaaacttgtgtccttgaaggaagaggcatccgaaatgggcggttacttcatcgtgaat
ggccttgagagatatattcgacctataattttgccaaaacgaaattatccgatgagcacg
gtacgaagttcatttagtgaaaagcgggaaggatatactgataaagcagttgtaataagg
tgtgtaagagctgatcaaacctcgttaacagttaaattatattaccttcgtaatgggagt
gcaaggcttggtttctggatacaaggaagagaatacatgcttccagtgggtattcttttg
aaggccctcattgacaccactgaccgagaaatttatgtaaatttgacaagctgttataat
aaaaagtatgaaaagggaaagggtgctgttggaacccagcttgttggtgaaagggcaaaa
attatcctagatgaagttcgtgatttgtctcttttcactcgtcttcaatgtctacaatat
cttggagagcatttccaacctattttccccgaactcagaaatgaaagccattatactgtt
gctaatgctgttctgaaggacttcatacttgtgcatctggatgacaattttgacaagttc
aatctgctcatcttcatgttgcagaaacttttttcacttatagatcagacatcggtgcca
gataaccctgatagcttgcaaaatcaggaggttttactcccaggccatttgatttcactt
tatcttaaggcaaaactagaagagtggctggagaagggaaaaacgatgcttctggacgag
attgataaaaaaggagagaaattcaatttcgaggactttatacaagttaagagagttttg
gcaaaaaatcatgcaagtgcagtcggcaaagccattgaaagtatgttgacatccggaaga
ttggcaacacaatcatctctggatctgcctcaggtgtcaggctatacactccaggctgaa
cggttaaactatttgcgatttctctcacattttcgtgctgtccatcgaggagccttgttt
gccggacttcgtactacaactgtgcggaagctattacccgaatcttggggttttctttgc
cctgtacacacacctgatggggggccctgtggattgctgaatcatatgactcgcacttgt
aggattacatcattctatgattctaaaggaaatataaaagattattttaaaattaaattg
tctatcctcaacattttaattgacattggaatgacacaagcattgccaaagatatttcta
cctggcccacctgaagttcttactgttcttctagatggttgtattgttggttttatccct
tccgctgaggttgagaaagttgttgctcacattcgtaaactgaaagtgtcatctgctgca
gtgattccaaatgatctggaagtgggatatgttcctttgagcatgggtggagcatatcct
ggtctctacctcttcacatcccccgcaagatttgttcgcccagtgagaaatatatcaatt
ccttccaatggaaatgaaaatattgaacttattggtccatttgaacaggtttatatggag
atacgatgtcctgacggtggagatggtggaagaaaaagtccatttcctgcaactcacgaa
gaaatccatccaacaggaatgttaagtgtagttgctaatcttacaccttggtcagatcat
aatcagagcccacgaaatatgtatcagtgtcagatggcaaagcaaacgatggcattttct
tcacaaacaattcaacatcgtgcagatcaaaagttgtaccatcttcagactcctcagtct
cccctcgttcgcacaagtgcatatactgaatacaatattgatgaatatccatcaggcaca
aatgctatagttgcagttctggcatatacaggatacgatatggaggatgccatgattcta
aacaagtcatctgtggaacgtggaatgtttcatggacaaatatatcagacagaaactatt
gacttggcaggacaaggccctgtggcagaacgatcttcaagagtattcagaaaaagtaac
ctagaaaaaacatcttgtccctcgattggttcagatggacttccacatgttggtcagatg
attcacccagatgagccctattgtagtagttacaatgaagtaacaaataaaacatttgtc
ttcaaaaaaaagggtactgaacctgcttacattgactatgtcgctgttgacacgaaaaat
aagaagcatataaggaaggctaacatacgttttcgatatcctcgaaaccctgttattggc
gacaaatttagcagtagacatgggcagaaaggtgtttgctctcagttgtggccagacatt
gacatgccattttctggaaatacaggaatgcgcccagatctcattataaatcctcatgca
tttccttctagaatgacaattgctatgcttttggaatctgttgcggctaagggaggaagt
ttacatggaaaatttaaagatgcaactccatttcgtagttcagtggagtctggatccaag
tctgcttcagttgtcgatgagcttggtgatatgttaaaagagaagggatttaattaccat
ggatgtgaggttctgtacagtggggtctatggaacagaactgacgtgtgaaatatttatt
gggcctgtttattatcaacggctccgtcacatggtttcagataaataccaagttcgatca
accggcactgtcgaccaggtcacccgacagccaataaaaggacgaaagcgtggtggaggg
atacgatttggagaaatggaacgcgattctctactagcacacggggctgcatatcttctt
catgataggctgcacactggttccgattatcacattgctgacgtgtgttccatttgtggg
agcatgctctcgacaacatttatccaggctcaaaaaccgacagtgcgggagattggtggg
ctaccaccgcgaagagctccgagtaaggtcacttgccatgcttgtcaaaccagtaaaggc
atggagacagtcgccatgccttatatatttagatatttagcagcagagttagcagcaatg
aacattaaaatgactctgaagcttaatcatggcgctaaccactctgatacaagtgtttaa
DBGET
integrated database retrieval system
