Vicia villosa (hairy vetch): 131601672
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Entry
131601672 CDS
T09680
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131601672
Transcription machinery [BR:
vvo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131601672
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_36
Motif
Other DBs
NCBI-GeneID:
131601672
NCBI-ProteinID:
XP_058729520
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Position
LG5:56373941..56378089
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AA seq
541 aa
AA seq
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MATAAVIGLSGGKRLLSSSYHYSDIVEKFSHTSDFSSTQYHLPPSRTIIVAKKSSKYTPT
FPPSERQNHSIKALKEHVVDSEQCFQGYTSSVDVDSEQCFQGYTSSADVDSEQCFQGYTS
SIDVDSEQCFQGYTSIDLDVGNYSLEALLLLQKSMLEKQWGLSFEREVLTHNSRREKIRR
KVPVTSSGVSARQRRMNIKRKITTKTASATMQLRSTISPDLIQNRFKGYVKGVVSKELLS
HAQVVKLSGKIKAGLSIDEHRSRLKERLGCEPSDDQVATSLKISRPELRAKIIECSLARE
KLTMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDPSKGFKISTYVYWWIRQ
GVSRALVENSRTLRLPKHLHERLSLIRSAQNRLEERGVTPTIDKIAKYLNMSQRKVKNAT
EAISKVFSLDREPFPSLNGLPGDTHHSYIADKQLENIPWNGVDEWALKEEVNRLINATLV
EREREIVRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLK
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagcagttattggactgagtggaggaaagaggctattgagttcatcttac
cattactcagatattgtagaaaagttttctcatacctctgacttttcctccacacagtat
caccttcctccttcaagaactataatagttgcaaagaaatcatcaaaatacactccaact
tttccaccatctgaaaggcagaatcactccatcaaagctcttaaggaacatgttgttgat
tcagaacaatgctttcagggatacacttcttctgttgacgttgattcagaacaatgcttt
cagggatacacttcttctgctgacgttgattcagaacaatgctttcagggatacacttct
tctattgacgttgattcagaacaatgctttcagggatacacttctattgacttagacgtg
ggaaattattctttggaggctcttcttttgcttcagaagtcaatgctggaaaagcaatgg
ggtctttcttttgaaagggaagtgttaacccataattctaggagggaaaaaatccggagg
aaggtgccagtcacttcttctggtgtgtctgcaaggcaaagaagaatgaatatcaagagg
aagatcactactaaaactgcttctgcaacgatgcagctgaggtccacaatcagtccggac
ctgattcaaaaccgtttcaagggatatgtgaaaggtgtagtgagtaaggaattgctctct
catgctcaagttgtaaagctatctgggaaaataaaagctggcctttccatagatgagcat
agatccagactgaaggaaagattaggatgtgaaccttctgatgatcaagttgcaacttcg
ttgaagatttcccgccctgaactacgagctaaaataatagagtgctctttagcaagagaa
aagttgactatgagcaatgttcgtttagttatgtccattgcgcaaagatatgataatatg
ggagctgaaatggctgaccttgtccagggtggtttaattggactacttcgcgggattgaa
aaattcgacccttcaaaagggttcaagatttcaacttatgtttattggtggatacggcag
ggtgtttcaagagctctagttgagaactcaagaacattaagattgccaaaacatttgcat
gagaggttatctttgatccgcagtgcccagaatagactcgaagagagaggagtcactcca
actattgataaaattgcaaaataccttaatatgtctcaaaggaaagttaaaaatgctacc
gaggctatcagcaaagttttctcccttgatagggagccattcccctctctgaatggtctt
ccaggagacactcatcatagttacattgcagataaacaacttgagaacatcccatggaat
ggagtagatgagtgggctctaaaggaggaagtgaacagactcattaatgcgacccttgtg
gaacgagagagagaaattgttcgtctttattatggactggataaagagtgtcttacgtgg
gaagacataagtaaacggataggtttgtcgagagaaagagtaagacaagttggacttgtt
gcattggagaaactaaaacatgccgccaggaagagggagatggaagccatgcttttgaag
cattga
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