Vicia villosa (hairy vetch): 131601785
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Entry
131601785 CDS
T09680
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03030
DNA replication
vvo03410
Base excision repair
vvo03420
Nucleotide excision repair
vvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131601785
03410 Base excision repair
131601785
03420 Nucleotide excision repair
131601785
03430 Mismatch repair
131601785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvo03032
]
131601785
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131601785
DNA replication proteins [BR:
vvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131601785
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131601785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RCF1-5-like_lid
AAA_19
AAA_30
BRCT_2
nSTAND3
AAA_assoc_2
RuvB_N
AAA_5
AAA_14
Sigma54_activ_2
Zeta_toxin
AAA_24
NPHP3_N
AAA_18
Rad17
AAA_16
AAA_33
TsaE
NTPase_1
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
131601785
NCBI-ProteinID:
XP_058729663
LinkDB
All DBs
Position
LG5:81360437..81369534
Genome browser
AA seq
1002 aa
AA seq
DB search
MSDIRKWFMKSHEKTNNAAAGNSKPSNPPKPSPVKPEPEKTVPEGQTSSGRRKTSKYFDT
DKSKPKDEIEETQALPAKRKNMNDSNEDDGDDTVLATNKKKLVGSTPTKKLKSGSGRGIP
QKPVDLDESDEDDEKNVSPIKSGGRGRGGRGASTQTTGGRGRGGGRGTAKKSADLEESDE
DDEKNGAKSGGRGRGGRGASTPASGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPNC
LAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKKTTYLLCDEDIGGRKSEKAKELG
TSFLTEDGLFDLIRASKPAKAPKQEESKKSLNKAVPSPSKVPLKVETKAVAVPSPSKIPL
KAETKASLSSCSPANQAKPKKAATVQSNVMWTEKHRPTNPKDIIGNQSLVLQLRNWLKGW
HEQFSNTGGNKKGKKQNDSTSKKAVLLSGTPGIGKTTSAKLVCQELGFLAIEVNASDSRG
KADSKIEKGISGSNSNSIKELVTNEALGTNMNRPKQSKTVLIMDEVDGMSAGDRGGVADL
IASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKKFMEVAKAERLQVNE
IALEELAERVNGDMRMALNQLQYMGLSMSVINYDDIKQRLLSNAKDEDISPFTAVDKLFN
FNAGKMRMDERITLSMSDPDLVPLLIQENYINYRPSSAGKDDNGIKRMQLIARAAESIAD
GDIVNVQIRRYRQWQLSQTSSLASCILPASLLHGSREVLEQGERNFNRFGGWLGKNSTRG
KNMRLMDDLHVHILASRESSSGRDTIRLEYLTLLLKKLTEPLKVLPKAEAVEQVVEFMNT
YSISQEDFDTIVELSKFKGHPNPLDGILPAVKSALTKAYKEQSKTRTVRAADLITLPGIK
KAPKKRIAAILEPADEGVEQGDGNNALDESEEENSDVEESGAATGEKLKSELQSLSSKGM
QVQLELKGTGSAKKASGGRGKGASASGQKVAPTAKAPAKRKR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacggaagtggttcatgaaatcacatgaaaaaaccaacaatgccgccgcc
ggtaactccaaaccctccaatccaccgaaaccttctccggttaaacctgaaccggagaaa
acggtacctgaaggtcaaacaagttcgggcagaaggaaaactagcaaatattttgatacg
gacaaatcaaagccgaaggatgagattgaagaaacacaggcacttccggctaaaagaaag
aatatgaatgatagtaatgaagatgatggagatgacactgttctggcaactaataaaaag
aagttagttggttcaactcctactaagaagttgaagagtggttcaggtagggggattccc
cagaaacctgtagatttggatgaaagtgatgaagacgatgagaaaaatgtgtctccgata
aaatctggtggtaggggtcgtggtggaagaggagcgtcgacacaaacaactggtgggaga
ggccgagggggtggtaggggaactgccaagaaatctgcagatttggaagaaagtgatgaa
gatgatgagaaaaatggtgctaaatctggtggaaggggtcgtggtggaagaggagcctca
acgccagcatctggtgggaggggccgaggaggtggtaggggtggattcatgaattttggt
gaaagaaaagatccaccacacaagggagaaaaggaagtccctgaaggtgctcctaactgt
ttggctggtttaacgtttgtaataagtggaacactagacagtttggaacgagaagaagcc
gaagatttgattaaacgccatggtggccgtgtcactggatcaatcagcaagaaaacaact
tatttgttatgtgacgaagatattgggggaaggaagtctgaaaaagctaaagagctagga
acttcattcctcacagaggatggattgtttgatttgatccgggcatcaaaacctgcaaaa
gctcctaagcaagaggaaagcaagaaatctctgaataaggcagtgccatccccgtcaaaa
gttcctctgaaagttgaaactaaggctgttgcagtgccatccccttcaaaaattcctctg
aaagcagaaacaaaggcctctttgtcttcatgctcacctgccaaccaagccaagccaaag
aaagctgctactgttcagtctaatgtgatgtggacagagaaacatcgacctacaaatcca
aaggatatcatagggaatcagtcacttgttttacagcttcgaaattggttaaaaggttgg
cacgagcaattttctaacacaggtggtaataaaaaaggaaaaaagcagaatgactctact
tccaaaaaggctgtcttgttaagtggaacccccggtataggcaaaacaacatcagcaaag
ctggtgtgtcaggagctgggtttcctggccatagaggtaaatgctagtgatagccgagga
aaagctgatagcaaaattgaaaaaggaattagcggaagtaattcaaattctatcaaggaa
cttgtgacgaatgaggcccttggcactaatatgaataggccaaagcagtccaaaactgtg
ctcattatggacgaggttgatgggatgtcagctggtgataggggtggtgttgctgatctt
attgctagcatcaagatatcaaaaattcccattatttgcatttgcaatgatcgttatagc
cagaaattaaaaagcctagtgaactactgtttgcttcttagttaccggaagcctacaaag
caacagatggctaagaagtttatggaggttgcaaaggctgaaaggcttcaagttaatgag
attgctcttgaggaattagcggaaagagttaatggagatatgcgaatggcactaaaccag
ttacaatatatgggcctctccatgtcagttatcaactatgatgatatcaagcagcgctta
cttagcaatgcgaaagatgaagacatttcaccattcacagctgttgataagctttttaat
ttcaatgctggaaagatgagaatggacgagaggattactcttagcatgagtgaccctgat
cttgttcctctacttatccaggaaaattatattaattatagaccaagctcagctggcaag
gatgacaatggtataaaacgcatgcagcttattgcccgcgctgccgagtctattgctgat
ggcgatatagtgaacgtacagattcgcagatatcgacagtggcagctctctcaaactagt
tctctggcatcatgtatacttcctgcttctttgttacatggatcaagggaagtacttgaa
cagggagaacgaaattttaatcgatttggtggttggttggggaagaattcgacaaggggt
aaaaacatgagacttatggatgacctgcatgttcacattcttgcatctcgcgaatctagt
tcgggaagggacactattcgcttggaataccttactcttcttcttaaaaaattgacagaa
cctctcaaagtccttcctaaggctgaagctgttgagcaagttgtggagttcatgaataca
tactcaatcagtcaggaagattttgatactatagtagagttatcaaaatttaagggtcat
cctaatccactagatggcattctgcctgccgtcaagtcagccttgacaaaagcatacaaa
gagcaaagcaaaactcggacggttcgagctgcggatctaattactcttcctggaattaaa
aaggcacctaaaaagagaattgctgctatattagaaccggctgatgaaggagtggaacaa
ggtgatggtaacaatgccctggatgagagtgaagaagagaactctgacgtggaagagtca
ggcgctgcaactggcgagaagctgaagtcagaacttcaaagtttgagttcaaagggcatg
caagtacaattggaattaaaggggactggtagtgccaaaaaggcatctggtggtagaggt
aaaggtgcttcagcatctggccagaaagttgctccaacggcaaaggctcctgcaaaaaga
aaaaggtga
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