Vicia villosa (hairy vetch): 131601941
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Entry
131601941 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131601941 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131601941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvo03000
]
131601941
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131601941
04121 Ubiquitin system [BR:
vvo04121
]
131601941
Enzymes [BR:
vvo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131601941
Transcription factors [BR:
vvo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
131601941
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131601941
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131601941
Ubiquitin system [BR:
vvo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131601941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Nab2-like_zf-CCCH_
zf-ANAPC11
zf-UDP
FYVE
Motif
Other DBs
NCBI-GeneID:
131601941
NCBI-ProteinID:
XP_058729855
LinkDB
All DBs
Position
LG5:complement(105698305..105706248)
Genome browser
AA seq
1048 aa
AA seq
DB search
MFLTCVLWYSQFLLTEIMSDEGERTCPLCAEEMDLTDQQLKPCRCGYEICVWCWHHIMDM
AEKDDTDGRCPACRSPYDKEKIVGTASKCERLLNEINMEKKVKNQKSKSKSADGRKQLSS
VRVIQRNLVYIVGLPLDLADEDLLQKREYFGQYGKVLKVSMSRTAAGVIQQFPNDTCSVY
ITYLKEEEAIRCIQNVHGFVLEGKPLRACFGTTKYCHAWLRNSPCINPDCLYLHEVGSQE
DSFTKDEIISAYTRSRVQQITGATTNMQRRSGNVLPPPLDDCTDYSTERPIINSAPTNSV
YTVRNSPPNGINGKHVPLPTSTAWGTQATSCQPPVGGLSHPSVLSKPKPDTVNSTLAFST
AVTGTIQASAAQGDGSRRPPSSDGSHNTLPRVKSELPKPSKQYNSLDSLTSAGEKISACA
VSPAPVNLKSELSSRPLSRDNGRGNCTITNTLNSTNITGHSFNSGPEEAVPATNEVIRNL
SSEFSSINIGRSSSIENCGITKPSNRPTDDVMTKSPQIQEGSQYDVDRFKDPITTNVVGK
TSSSDSGIFSPKEQCGGILNSQSQVVSDTADIEDDVASFDNQRLKDPEVCRSYLPKATNF
LNVSKLSSPCMPYGEPCTAGNAGSLSSEDRVREESNLHSSSMLCNGYPEKLIRGTSNGFL
HDERNRQSIGRLVGDAVDTGCDESIDKGESSIISNILSIDFDPWDDSLASPHNIVKLLSE
NTDSQPAPLKKSSSWKVQNNNQSRFSFARQEESEIQTFDVHPSYAFNQQQSKSHTLNQNL
AERDFYMEKLGIANGFPTSNFEEAENISSAHSTASSNKLSAISRAQVSAPPGFSIPSRLP
PPGFSSHERSEQTFDSLSGNSLLDHSSFLRNSHQTHSAGNIGGTGDIEFMDPAILAVVGK
GRLQGAQNSQSLDMRSNFNPQLNNYFDNEARLQFLMQRSLTQQQNRFPEIGNTYSQLGDS
YGISSRLDQSQVSNLAPFPQLSMQQSTNAVFSNGQWNGWNEMQSGNGLGVAELLRNERLG
FNKFYPGFDDSKYRMPNSGDIYNRTFGM
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgacatgtgttttgtggtattcccagtttttgttaacggaaatcatgagtgat
gaaggagaaaggacttgtcctctctgcgccgaagagatggatttgacggatcagcagttg
aaaccttgtcgatgtggttatgagatctgtgtatggtgttggcaccacataatggacatg
gccgagaaggatgatactgatgggcgatgccctgcttgtcgttctccttatgacaaggaa
aagattgttgggacggcgtcaaagtgtgaaagattgctgaatgaaattaatatggagaaa
aaggtgaagaatcaaaaatcaaaatcaaaatctgctgatggacggaagcagctcagtagt
gtgcgagtgattcagcgaaaccttgtttacatagttggattgcctctggatctggcagat
gaagatcttctccagaagcgagagtattttggtcagtatgggaaggtcttaaaagtgtca
atgtcacggacggcagctggtgtcattcaacagtttcctaatgatacttgcagtgtatat
attacttatttaaaggaagaggaagcaattcggtgtattcaaaatgtacatggatttgtt
ttggagggtaaacctttaagggcttgttttggaaccacaaaatattgtcatgcatggctc
cgaaattcgccttgcatcaaccctgattgtctatatctgcacgaggttggctctcaagaa
gatagctttacaaaagatgaaataatatcagcttacactagaagtagagttcaacaaatc
actggtgccacaactaatatgcaacgccggtcggggaatgtattacctcctcctctggat
gattgcacagattattcgacagaaaggcccattattaatagtgctccaactaactctgtc
tacacagtgcgaaattcgcctccaaatggaatcaatgggaaacatgtacctcttcccact
agtactgcatggggtacacaggctacaagttgtcagccccctgttggaggtctatcgcac
ccatctgttttgtccaagccaaagcctgatacagttaacagcacacttgccttttctact
gccgttacgggaacaattcaggcttctgcagcacagggtgatggttcaagaaggccgcca
tcaagtgatgggagtcataatacattacctagggtgaaaagtgaattgccaaaacctagt
aaacaatataatagcttggacagtcttaccagtgcaggtgaaaaaatttcagcttgtgct
gtttctcctgcacctgtcaatttgaagagtgagctgtcttctcgaccattatcacgagat
aatggtagaggcaattgtactataacaaacacattaaattctactaacattactggacat
tcttttaactctggtcctgaggaagcagtgcctgctaccaatgaagtgattcggaatttg
tccagtgagttctcctcaattaacattggtagaagttcctcaattgaaaactgtggtata
accaaacctagtaaccggccaactgatgatgtcatgactaaatctcctcaaattcaagaa
ggatcacaatatgatgttgatagatttaaagacccaataacaacaaatgtggttggtaaa
acttcctcatcagatagtgggatttttagtccaaaggaacaatgtggagggatattgaac
tctcaatctcaagtagtatcagatacagctgatatcgaagatgatgtagcatcttttgat
aatcaaagactcaaggatccagaagtttgtcgttcttatttgcctaaggcaacaaatttc
cttaatgtatcaaaactttctagcccttgtatgccatatggcgaaccttgtactgctgga
aatgctggttctctatcttctgaagatagagttcgggaggaatctaatttacattcgtct
agcatgttatgtaatggctatcctgagaagttgatccgcggaacctctaacggctttctt
catgatgaaagaaacaggcaaagcattggacggttggttggtgatgccgttgatactggg
tgtgatgagtcaattgataagggggaaagtagtataatctcaaatattctgtccattgat
tttgatccatgggatgactccctagcatcaccccataatatagtgaagctgttgagtgaa
aatactgatagccagcccgctcctttaaaaaaatctagttcttggaaagttcaaaataat
aaccaatcaaggttctcttttgcaagacaggaagaatctgaaattcaaacttttgatgtg
catccgtcttatgctttcaaccagcaacagtctaagagccacacactcaatcagaatctg
gcagaaagagacttttatatggaaaagttgggcattgcaaatggctttcctaccagtaat
tttgaggaagctgaaaatataagcagtgctcattcaactgcttcttccaataagctttct
gctatttcaagagcacaagtttcagctccgccaggtttttcaattccaagcaggctgccg
cctcctggtttttcttcacatgagagatcagagcagacttttgactccctatctgggaat
tccttacttgatcattcttcttttttgagaaattcacatcagacacactcagctggaaat
attggtggcacaggcgacattgaatttatggatccagctattttggcagttgttggcaag
gggagacttcaaggtgcgcagaacagccaatcattggacatgcgttcaaatttcaatcca
caattaaataattacttcgacaatgaagccagactacagttcctgatgcaaagatctctc
actcagcagcaaaacaggtttcctgaaattgggaatacttattctcaacttggtgattca
tatggtatttcttctaggttagatcaatctcaagtcagtaacctagcccctttccctcag
ctgtctatgcagcagtctacaaatgcagtcttttctaatggccaatggaatgggtggaat
gagatgcagagtgggaatggtctgggggttgccgaacttttgaggaacgaaagacttgga
tttaacaagttttacccaggatttgatgattcaaaatatcggatgccaaattctggggat
atctacaacagaacttttggcatgtga
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