Vicia villosa (hairy vetch): 131602552
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Entry
131602552 CDS
T09680
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131602552
09123 Folding, sorting and degradation
03018 RNA degradation
131602552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131602552
03041 Spliceosome [BR:
vvo03041
]
131602552
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131602552
mRNA degradation factors
5'-3' decay
Lsm complex
131602552
Spliceosome [BR:
vvo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131602552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
131602552
NCBI-ProteinID:
XP_058730680
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Position
LG5:132895392..132897740
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AA seq
98 aa
AA seq
DB search
MSTGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDSNLDLSKLRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccggacctggacttgagtccctcgtagatcagacaatttcagttattacaaat
gatggacgaaatatagtgggaattctaaaaggttttgatcaggcaacgaatataattctc
gatgaatcccatgaacgagttttctctaccaaggaaggtgttcagcaacttgttctgggt
ttatacatcattaggggtgacaacataagtgttgttggtgaactggatgaagaactggat
tctaaccttgatttgtccaagcttagagctcatcccttaaagcctgtcatccattga
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