Vicia villosa (hairy vetch): 131603199
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Entry
131603199 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131603199
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03015
mRNA surveillance pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131603199
09122 Translation
03013 Nucleocytoplasmic transport
131603199
03015 mRNA surveillance pathway
131603199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131603199
03041 Spliceosome [BR:
vvo03041
]
131603199
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131603199
Spliceosome [BR:
vvo03041
]
Complex C
Other components
EJC/TREX
131603199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
131603199
NCBI-ProteinID:
XP_058731463
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All DBs
Position
LG5:complement(151310491..151314771)
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AA seq
660 aa
AA seq
DB search
MSSTETIVDAVVDTVVKKSSETVETDEKGNSAVVHPIETENEEMVPVVKSDKQYGVIEPV
DDDSIAIAEPRNGHGQDSVTKQENEDSKPQLECDLKPQCEHLTPNSLLPENQVSEVNLSL
GSQVKSDSVSCNQKNTIIANGDKLEQEIVRSKMVEEPSSRIDVPVYDESHLMDVEEPDEK
KVSVEENSSINRGPNLNMTNSNEDVGYPEKLNLDGNSDDESMDEDMPESKQFDSKFNNEL
GEKGESVEITNLKERDTVVVRDGLSSEGGDYHNNDIPSVSLVKKQKFTDQASVENNNPAK
RQRWNSEPVKGSNIQRSTVRPATAPMGEPISLKCNFSWSDSPAIDVAPKERIVPPSQWLP
TNSLRIDGFLRPFTLNAVQELLGKTGKFTSFWMDEIKTHCYVSYTTVEEAVETRNAVYNL
QWPPNVGHLLVAEYVEPEDVKMKLEPPPPVDFVNNDSIALPHTQQLMSKLPPAARERFPP
PPSLSMLPPAARERFPPLQSLPMLPPAARERFPPPPSLTEFPPVAREQLPPPPSLSMLPP
AAREKLPPPPLLTELPPPPLLTELPPPPREWLPRSPPREWLLLSPPREWLPLPPPSSNLS
PDARERIPSRPPLPKKVDKPIVTIDDVFRKTRATPRIYYLPLSDEQVAAKLAARGRSIMQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaactgagaccatagttgatgcagtagttgatactgttgtaaagaaaagttct
gaaactgttgaaacagatgaaaagggtaacagtgctgtagttcacccaattgaaacagaa
aatgaagaaatggttccagttgtaaagagtgacaagcagtatggtgttatcgagccggtt
gacgatgatagtattgcaatagcagagccacggaatggccatggtcaagattctgtaacc
aagcaggagaatgaggattcaaagccccagctggagtgcgacttaaagcctcaatgtgag
catcttacacccaactctttgcttcctgaaaatcaggtatctgaggtcaaccttagttta
ggctcacaagtaaaatctgattctgtttcttgtaatcaaaagaatactataattgctaat
ggtgacaaattagaacaagaaattgttaggtcaaagatggtggaagaaccatcatccaga
attgatgtgcctgtttatgatgaatcacatttgatggatgttgaagagccagacgagaaa
aaggtatctgttgaggaaaatagcagtatcaacagaggaccaaacctgaacatgaccaat
agcaatgaagatgttggctatccagaaaagttgaacttggatggcaattctgatgatgag
tccatggatgaggatatgccggagagcaagcaatttgattctaagtttaataatgaactt
ggagagaaaggggagagtgttgaaataacgaatcttaaggagcgtgatactgttgtggta
agagatggtctatcttcagaaggtggtgactaccataataatgatattccttccgtttcc
cttgtcaaaaaacaaaaatttacggatcaagcatcagttgagaataacaatcctgcaaaa
cgacaaaggtggaactctgaaccagttaaaggttcaaatattcaaaggtcaactgtcaga
ccagctactgcaccaatgggtgagccaatttcattgaagtgcaatttctcctggtctgat
tccccggcaattgatgttgcgcccaaagaacgcattgttccaccgtcacaatggctccct
actaattccctcagaatcgatggtttcctccgaccttttaccttaaatgcagtgcaagaa
cttttgggtaaaactgggaaattcaccagtttttggatggatgaaataaaaacacattgc
tacgtcagttacacaactgttgaagaagccgttgagacccgaaatgctgtttataatctt
caatggcctccaaatgttggacaccttttagttgctgagtatgttgaacccgaagatgtg
aaaatgaagctagaacctcctccccctgttgactttgtcaacaatgattcaatagctctt
ccacatactcagcaactgatgtcaaagctcccgccagcggctagagaacggtttccgccg
ccaccatctttgtcaatgctcccgccagcggctagagaacggtttcctccgctacaatct
ttgccaatgctcccgccagcggctagagaacggtttccgccgccaccatctttgacagag
ttcccgccagtggctagagaacagcttcctccgccaccatctttgtcaatgctcccacca
gcagctagagaaaagcttccgccaccaccactattgacagagctcccgccaccaccacta
ttgacagagctcccgccaccacctagagaatggcttccacggtcaccacctagagaatgg
cttctactgtcaccacctagagaatggcttccactgccaccaccatcgtcaaatctctcg
ccagatgctagagaacggattccgtcgcgaccacccctcccaaagaaagttgacaaaccc
attgttacaattgatgatgtctttcggaaaaccagagcaactcctcggatctattattta
ccattatccgacgagcaagttgcagcaaaactggcagcaaggggcagaagcattatgcag
tag
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