Vicia villosa (hairy vetch): 131603656
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Entry
131603656 CDS
T09680
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03022
Basal transcription factors
vvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131603656
09124 Replication and repair
03420 Nucleotide excision repair
131603656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131603656
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131603656
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131603656
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131603656
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131603656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
131603656
NCBI-ProteinID:
XP_058732044
LinkDB
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Position
LG5:163625665..163634303
Genome browser
AA seq
761 aa
AA seq
DB search
MGYGEKGRPFKKPKASSKFEDSRKGFAEEDEEDDAYDDDEGRTKDFSKLELKPDHTNRPL
WACDNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI
ISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDAIAR
ARIISEGSHGDKFTISKAAGEIEGTHDELLNEAEVAAVAEEKETHAFEVDPAQVENVKQR
CLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLP
CGAGKSLVGVSAACRVKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFR
GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKS
HCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFT
EYLKKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKP
MIYGATSHVERTKILHAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ
RLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS
LPPSDEGSRLNYHHLEDQLALLGKVLNAGDDAVGLEQLEEDSDELALKSARRSQGSMSAM
SGAKGMVYMEYSNGRKGQMVKSKPKDPAKRHHLFKRRYGTT
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgggatacggtgaaaaaggaagaccattcaaaaagccaaaagcctcatctaaattcgaa
gattcgagaaaaggattcgctgaggaggacgaagaggatgatgcatacgatgatgacgaa
ggaagaacaaaggattttagcaaattagagttgaaaccggatcacaccaatcgtcctctt
tgggcttgtgacaatggacggatattccttgaaactttctcgcctttgtacaagcaagct
tatgattttctcattgccatcgcggagcctgtttgcaggccggagtctatgcacgaatat
aatcttactccgcattcgctgtatgctgcggtttcggttggtttggaaactgaaacgatt
atatcggttttgaacaagttgtccaagaccaagcttcctaaagagatgattaagtttata
catgattctactgcaaattatgggaaagtgaaacttgttcttaagaagaatcggtacttt
gtggaatctccatttccagaggtgttgaagacactgctcagggatgatgctatagctcga
gcaaggatcatttctgagggttcacatggagataaatttacaatcagcaaagcagcaggt
gaaattgaaggcactcatgacgagttgctaaatgaagcagaagtagcagctgttgcagaa
gagaaagaaactcatgcattcgaagttgatcctgctcaggttgaaaatgtaaagcaacgt
tgcttgccgaatgccttaaattatcctatgttggaggagtatgacttcagaaatgataca
gtgaacccagaccttgacatggaactaaagcctcaagcacaaccacggccatatcaagag
aagagccttagtaaaatgtttggaaatggtagagcaagatctggtatcatagttctacct
tgtggtgctggaaagtccctagttggtgtttcagcagcttgccgggtaaaaaagagctgt
ctttgtttggcaactaatgctgtctccgtagatcagtgggcttttcagtttaaactatgg
tcaactattcgagaagaacaaatatgtcgtttcacatctgatagcaaagagagattccga
ggtaacgctggagttgttgtgacaacatataatatggttgcttttgggggaaaacggtct
gaagaatctgaaaagatcattgaagaaatacgaaacagagaatggggattgctgcttatg
gacgaggtacacgtggttcctgcccatatgtttcgaaaagtcatcagtatcactaaatct
cactgcaaacttgggctcacagccacacttgtgagagaggacgagcgaattacagatctt
aacttcctaattggtcccaaattgtacgaggcaaattggttagatcttgtaaaaggtgga
tttattgcaaatgtacagtgtgctgaagtatggtgtccaatgacaaaagagttttttacc
gagtatctaaagaaagagaactccaagaagagacaggccctttatgtgatgaatccaaat
aaattcagagcatgcgagtttctcataaattaccatgaaagggcacgtggcgataaaatt
atagtttttgctgataatctttttgctcttaccgaatatgccatgaaactccgcaaacca
atgatatatggtgctacaagccatgttgagaggacaaaaattctacatgcattcaaaact
agcaaagatgtaaatactgtttttctttccaaggttggtgacaactccatcgatattcct
gaagcaaatgttataattcagatctcttcacatgctggttcaaggcgtcaagaagctcaa
cgtcttggtcgtattcttagggcaaagggaaagcttcaggataggatggccggtggcaaa
gaggagtataatgcatttttttattcccttgtgtcgactgatacccaagagatgtattac
tcaactaagaggcagcaatttctaatcgatcagggttacagctttaaggtaattacaagc
ttgcctccatctgatgaaggatctcgcttgaactatcatcatctcgaagatcaattggca
cttcttggaaaggtactgaatgctggtgatgatgcagttgggttagagcaactagaagaa
gattccgatgaactagctcttaagagtgcccgtcgttctcaaggatcgatgagtgcaatg
tcaggtgccaaagggatggtctatatggagtacagtaatgggcgtaaaggccaaatggtc
aagagcaagccgaaagatccagcaaagagacaccacttatttaaaagacgatatggcaca
acctaa
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