Vicia villosa (hairy vetch): 131604009 Help Entry 131604009         CDS       T09680                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism vvo  Vicia villosa (hairy vetch) Pathway vvo03013   Nucleocytoplasmic transport vvo03040   Spliceosome Brite KEGG Orthology (KO) [BR:vvo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     131604009   09122 Translation    03013 Nucleocytoplasmic transport     131604009  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vvo03019]     131604009    03041 Spliceosome [BR:vvo03041]     131604009 Messenger RNA biogenesis [BR:vvo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      131604009 Spliceosome [BR:vvo03041]  Complex C   Other components    EJC/TREX     131604009  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     131604009 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N Motif Other DBs NCBI-GeneID:  131604009 NCBI-ProteinID:  XP_058732479 LinkDB All DBs Position LG5:172740404..172761266 Genome browser AA seq 1867 aa AA seqDB search MSVPPVQCVYVTEDCVREWKSGNSSLKVSQPVPMLRFLYELAWTMVRGELPFPKCKVALD SVIFSDKASAEKVASNFADIVSQMAQDLTLSGEFRSRLIKLARWLVESELVPVRLLQERC EEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAP TQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNDVFIELIPIFPKSHASQILG FKFQYYQRMEVSNPVPYGLYRLAALLVKQDFIDLDSIYAHLLPKNEEAFEHYSTFSSKRL DEANKIGKINLAATGKDLMDDEKTGDVTIDLFAALAVETDAVEERKSELQNSQTLGLLTG FLSVDDWYHAHVLFERLSPLNPVEHIQICDNLFRLIEKSISSPYDVIRQAHLQNPGSSTG GRTDAMDVDNPPGHHSFIDLPKELFQMLSCTGPFLYRDTMLLQKVSRVLRGYYLSALELV SHGDSALNSQFHGIGNPHLHLKEAKLRVEDALGACLLPSLQLVPANPAVGQEIWELMSLL PYEARYRLYGEWEKDDDRYPMLLAARQTSKLDTRRILKRLAKENLKQLGRMVAKLAHANP MTVLRTIVHQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLALAGRDKLKDDGLNLS DWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENL TEEQLDSMAGSETLKYQATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQH RSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHL DPEVAFLIYRPVMRLFKSQRSPNVCWPLDDRNAASDSSTNFESDPADHLGSMFLDTGSNK KPISWSYLLGTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHASLKS LEEISDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSSRLSYAKDKWLSSCPD TLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHKLHSLGTPFFNTVNHIDVLICKTLQPMI CCCTEYEVGRLGRFLYETLKIAYHWKKDESIYERECGNMPGFAVYYRYPNSQRVTYGQFI KIIMQVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAK IKSDEREDLKVLATGVAAALAARKPSWVTDEEFSMGYLELKPAPTMSKSAAGNSAAVQSG TGLHVSQTESASGKHLDSENRVKDQTAKIKSADGKSERTESITVTKSDSGQVKLKGSSMV NGLDAQSSLPSPAGQSGALKSSENSKQVEESISRAPDEHVTKNVESKTSAKRSVAAGSLL KASKQDPLKEDGRSSKTVARTSGSSSSDKDLQAHASDGRHTGTNISSSVSANGNSVLGSA KGLAPLAKNSFDGSGIESKAEVGAAKSSMAKDDGNDVADFARGSSSRVVHSPRHENTATS KSSDKSQKRAGSVDELDRLGKRRKGDVDLRDLESEVRFSEREKLMDPRLVDDKVGPDELG MYRAGDKTLERPKEKGNERYEREHRERLDRLDKSRSDDFIVEKPRDRSIERYGRERSVER MQERSSERNFNRLPDKAKDDRSKDDRNKLRYNDALIEKSHAEGRFHGQSLPPPPPLPPNM VPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKEQRRSEETVILQEDPKRRKDDDFRDR KREEMKVEEKEREREKANIPKDDLDLNAATKRRKLKREHLSTMEPGEYSPVAPALPPPSI GMSQAYDARDRKGPIIQHAGYIDEPSLRIHGKDVANKLNRRDIDPLYDREWDDEKRQRAD QKRRHRK NT seq 5604 nt NT seq  +upstreamnt  +downstreamnt atgtctgtgccgccggtgcagtgtgtatacgtaacagaggattgcgttcgcgaatggaag agtggaaactcttctctcaaggtctctcaacccgttccaatgcttcgctttctctacgaa ctcgcctggaccatggttcgaggtgaattgccgtttccgaagtgtaaagtagcgttagat tcggttatattctcggataaagcttcagctgagaaagtagcctcgaattttgcagatata gtgagccagatggctcaagatcttacattgtccggagagtttcgttctcgtctcattaaa ctggcaagatggcttgtagaatctgaattagttccagttagattacttcaagaacgctgc gaggaagagtttttgggggaggctgaatttatcaaaattaaggctcaggagcttaaggga aaagaggtcagagttaatacacgacttctttatcagcaaaccaaattcaaccttctcaga gaagagagtgaaggctatgccaaactggtcactctactttgtcgggactctgaagcgccg actcaaaaaggatctgcatcaacaattggcattattaagtcattgattggccattttgat ttggatccaaaccgtgtttttgatattgtactcgagtgttttgaacttcagcctgataat gatgtgttcatagagctgattcctatttttcccaagtctcatgcttcacagattcttgga tttaaatttcaatattatcagcgcatggaagtcagtaatcctgtaccgtatgggctttat agacttgcagccttgctggtaaagcaagactttattgatcttgatagcatatatgctcat ttactccccaagaatgaagaagcatttgagcattatagcactttctcttccaagcgcctt gatgaggctaataaaattggaaaaataaaccttgctgctactgggaaggatctaatggat gatgagaaaacaggggatgtcactattgatctttttgctgctttagccgtggaaactgat gcagttgaggagcggaaatccgagcttcaaaatagtcaaactttgggcttgcttactggc tttctttctgtggatgactggtatcatgcacatgtactatttgaacgtctctcaccactc aatccagtggaacatatccaaatatgtgataatttgtttaggcttattgagaagtcaatt tcttcaccgtatgatgttattcgtcaagcacatcttcaaaatcctggatcgtccactgga ggcaggactgatgctatggacgtagataatcctccaggacaccattctttcatagatctt ccaaaggagctttttcagatgctttcttgtactggaccttttctctaccgagatactatg ctgttacagaaggtttctagggttttgagaggttattacctttctgctcttgagcttgta agtcacggcgacagtgccttgaattctcaatttcatggtattggaaatcctcacctgcat ttgaaggaagcaaaactaagagtggaggatgctttgggagcttgtctactaccttctcta cagttggttcctgctaatccagctgttggccaggaaatttgggaactaatgagtcttctt ccttatgaggcacgctatcgattatacggtgaatgggaaaaagatgatgatcgctatcct atgctgttggctgccagacaaacttcgaagttagacactagacgtattttgaagcggctg gctaaggaaaatttaaagcagctgggtcgaatggttgcaaaattagctcatgccaaccct atgactgtccttcgaacaattgttcaccagattgaagcatacagagatatgattgctcct gtggtggatgcttttaagtatttgactcagcttgaatatgatatattggaatacgtggtt attgagcgattggcacttgctggacgtgataagttgaaggatgatgggcttaatttgtca gattggcttcagtctctagcttcattttggggccacctatgtaaaaagtacccatcaatg gagttgcggggccttttccagtatcttgtgaaccagctaaaaaggggacaaggaattgag cttgttctactgcaggagcttatccaacaaatggcaaatgttcaatacacagagaacttg actgaggaacagctggattctatggctgggagtgagactctgaaatatcaagcaacttcc ttcgggatgactcgaaataataaggcattgataaagtcaactagcaggcttagagatgca ttacttcctaaagatgaaccgaagttggcaacccccctcttgcttcttcttgctcagcat cgatctctggttctcgtcaatgcagatgcaccctacattaagatggtcagtgaacagttt gatagatgccatggaactcttcttcaatatgtcgactttctaggcagtgcagtcacacca ggatcaaattatgctattcttattccctcacttgatgacctggtccatctttaccacttg gatcccgaggttgctttcttgatatatcgccctgttatgagacttttcaagtctcaaaga tctcccaatgtttgctggcccttggatgatagaaatgctgcaagtgattcgtctacgaac tttgagtctgatcctgcagatcatcttggtagtatgtttctagatactggctccaacaaa aaaccgattagttggtcatatcttcttggtactgttaaaactatgttgccttcaaaagca tggaatagcctatctcctgatctatatgcaacattttggggtcttacattatatgatctg tacgttccgaaaaatcgttatgagtcagaaatagccaagcttcatgctagtcttaaatct ttggaggagatttctgacaattcaagctcagcaatcaccaagaggaagaaagaaaaagaa agaattcaagaatctcttgaccgtctgattagtgaactgcataaacatgaagaaaatgtc gcatctgtcagcagccggctctcttatgcaaaagacaaatggttaagttcctgtcctgat accttgaagattaatatggagtttcttcagcgctgtatatttccacgctgtactttcagt atgccagatgctgtttattgtgctatgtttgtacacaaacttcactcccttggaactccc ttttttaacacagtcaaccacattgatgtgctaatttgtaagacccttcaaccaatgata tgctgctgcactgaatatgaggttggtaggcttggcaggtttctctatgagactttgaag atagcttaccattggaagaaagatgaatctatttatgaacgtgagtgtggaaacatgccg ggatttgctgtttattatcgatatccaaatagtcagcgagttacatatggacagttcatt aagataataatgcaggtacactggaagtggagtcaaagaatcacacggttactgattcag tgtctggaatctagcgagtacatggaaattagaaatgctcttataatgttgactaaaatt tctagtgttttcccagttacacggaagagtggcatcaaccttgaaaagcgggtagctaaa attaaaagtgatgaaagagaggatcttaaggtgttggcaactggtgtagcagcagcactg gctgctaggaagccttcttgggtgactgatgaagaatttagtatgggttatcttgagttg aagccggcaccaactatgtctaaatctgctgcaggaaattctgcagctgtacaaagtgga acaggtcttcatgtttctcaaactgaatctgccagtgggaaacatttggactcggaaaac agagtcaaagaccagacagcaaaaataaaatctgcagatggcaagtcagaaagaactgaa agtattacagtgacaaaatctgattctggccaggtaaaactcaagggtagctcaatggtg aatggattggatgctcaatcttctctaccctcacctgctggacaatccggggcattaaaa tcctcggaaaactcaaagcaagtggaagaatcaataagtagggcaccggatgaacatgtt acaaaaaatgttgagtctaaaacctctgcaaaacgttcagtggctgctggttctcttttg aaggcatcaaaacaagatcctttgaaagaagatggtagatctagtaaaactgttgctaga acttctggttcctcaagcagtgacaaggatcttcaggcccatgcatcagatggaagacac actggaacaaacatctcttcttcagtcagtgctaatggtaacagtgttttaggttctgca aagggcttggctccattggcaaaaaattcatttgatggttctggtattgaatcaaaggca gaggttggtgctgccaagtcttctatggcaaaggatgatggaaatgatgttgctgacttc gcaagaggatcctcttctcgtgtagtccattcccctagacatgaaaacacggctacctcg aagtctagtgataaaagtcagaagcgagctggttctgttgatgaactagacagactaggt aaacggaggaaaggggatgttgatctaagagatttggagagtgaagttcgattctctgaa agagagaagctaatggatcctcgactggttgatgataaagtgggaccagatgaacttggt atgtacagagcaggtgataagacattggaaaggccaaaagaaaaagggaatgaaagatat gaaagggaacacagggaaagattggaccgactggacaagtcccgtagtgatgactttatt gtagaaaaacctagggacaggtcgatagaaaggtatggaagagaacgatctgttgagaga atgcaagaaaggagcagtgagaggaattttaatagactccctgacaaggctaaggatgac agaagtaaggatgatagaaataaattacgatataatgatgcattgatagaaaaatcccac gctgagggccgcttccatggacaaagcttgcctccgccaccccctttacctcctaatatg gttcctcaatctgtaggggctggtaggcgtgatgaagatgctgataggaggtatggagct acaaggcattctcaaagactttctccaaggcatgaagaaaaagaacagagaaggtctgaa gagactgtgattttgcaggaggatcctaaacgtagaaaagatgatgattttcgagatcgg aagcgtgaagaaatgaaggtagaagagaaggaaagggaaagagagaaagcaaacattcct aaagatgatttagatttaaatgctgcaaccaagagacgtaaacttaagagggaacatcta tcgactatggagcccggggagtactcaccagttgctcccgcacttcctccccccagtatt ggtatgtcacaagcatatgatgcaagagacagaaagggtccaatcatccagcatgctggt tacatagatgaacctagtcttaggattcatggtaaggacgtagccaacaagctgaatcgt cgtgacatagatcccttatatgaccgggaatgggatgatgagaagagacaaagagctgat caaaagcgaaggcatcggaagtaa

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