Vicia villosa (hairy vetch): 131604548
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Entry
131604548 CDS
T09680
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03030
DNA replication
vvo03420
Nucleotide excision repair
vvo03430
Mismatch repair
vvo03440
Homologous recombination
vvo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131604548
03420 Nucleotide excision repair
131604548
03430 Mismatch repair
131604548
03440 Homologous recombination
131604548
03460 Fanconi anemia pathway
131604548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvo03000
]
131604548
03032 DNA replication proteins [BR:
vvo03032
]
131604548
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131604548
Transcription factors [BR:
vvo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131604548
DNA replication proteins [BR:
vvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131604548
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131604548
MMR (mismatch excision repair)
131604548
DSBR (double strand breaks repair)
HR (homologous recombination)
131604548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
131604548
NCBI-ProteinID:
XP_058732965
LinkDB
All DBs
Position
LG1:complement(39220339..39223434)
Genome browser
AA seq
609 aa
AA seq
DB search
MAKTVSPNAISYLFANPSPDSSSDIPDIVVQVVDLKFVGNRYMFYANDGMKKVNSILPTN
QSSDVLSGKIQNLGLIRILDYTLNDIPNKSEKYLLVTKCEPVSPALEVEIKSEQPSITLK
PKQESGIDLKPKQGVVSKSAAQIVHEQHGNSAPAARMAMTRRVRPLVSLNPYMGTWTIKV
SVTSKGTLRTYRNARGEGCVFNVELTDEDGTQIQATMFNDAARKFYEKFVMGKVYYVSKG
TLKVANKQFKTVQNDYEMTLNENSEVEEVASEASFVPETKFNFVPIDQLGPHVNKSDLVD
VVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGELATNIGQELLDMADK
SPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQKLRCWYDSEGKDTAMASLSSGST
NSGGGSRSVYSDRVSLSYITSNPSLGAEKPAFFSIRGYINSIKPDQAMWYRACKTCNKKV
TESIDDGYWCESCQKNDQECNLRYIMIAKIIDASGEAYISAFNEEAERLIGCSADELGNL
RSQEGEENPYQMKLKEATWVPHLFRVSVSQNEYNNEKRQRITARAVVPVDFAAESKILLE
DISKMIASH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaactgtcagccccaacgccatttcttacttgtttgcaaatccatctcccgat
tcttcatcagatattcctgatatcgttgttcaagttgttgatctaaaattcgtgggaaac
agatacatgttctatgctaatgatggaatgaagaaagtgaactcaattcttccgacgaat
cagtcctcggatgtgctctccgggaagattcagaatctcgggcttattcgcattcttgat
tacactctgaatgatattcccaataaatctgagaaatatcttcttgtaaccaagtgtgaa
cctgtttctcctgcgcttgaagtggagataaaaagtgaacagccaagtatcactttgaag
ccaaagcaagaatctggtattgatttgaagccgaagcagggtgttgtctcaaaatctgct
gctcagattgtacatgagcaacatggaaattcggctcctgctgctagaatggctatgaca
cgtagggtgcgtcctcttgtttctttgaatccttatatgggtacttggacaatcaaggtc
agtgttaccagcaaaggaaccttgcgtacatataggaatgctagaggagaaggatgtgta
ttcaatgttgaattaactgatgaagatggtactcagattcaagcaacaatgtttaatgat
gcggctaggaagttttatgaaaagtttgtaatggggaaggtttattatgtttcaaaaggg
actttgaaagttgctaacaaacagttcaaaactgtgcaaaatgattatgaaatgacactg
aatgaaaactctgaggtggaagaggttgctagtgaagctagttttgttccggagacaaaa
ttcaactttgtaccaattgatcagttgggtcctcatgtcaataagtctgatcttgttgat
gttgttggaattgttaagaatgtctcttcaacaatgagtattagaaggaagagcaacaat
gagactgttcccaagcgtgacattacaattgcagatgaaagcaagaagacagttgttgtc
tctttgtggggtgaacttgcaactaacataggacaagagttattggacatggctgataaa
tctccagtagttgcaatcaaatctgtgaaggttggcgactttcaaggtgtttctttgtca
gctataagcaaaagtttggtcctaattgatccagaagtacctgaagctcagaagctcaga
tgctggtatgactctgaaggcaaggatactgcaatggcttctttaagctctggctcaact
aattctggtggtggaagcagatcagtgtactctgaccgtgtttcactctcttacataaca
tccaacccctccttgggggctgagaagcctgctttctttagtatcagaggatacataaat
tccattaagccagatcaggcaatgtggtatcgtgcttgtaagacttgcaataagaaagtt
actgaaagcattgatgatgggtactggtgtgaaagttgccagaaaaatgatcaagagtgc
aatttaagatatattatgattgcaaaaattattgatgcaagtggtgaggcatatatatca
gcctttaatgaagaagctgagaggctcattgggtgttctgctgatgagctaggcaacctt
agatcacaggagggagaagaaaatccttatcagatgaagttgaaggaagctacttgggtt
ccacacctctttcgtgttagtgtttctcagaatgagtataataatgagaagaggcaaagg
ataacagcacgggcagttgtccctgttgactttgctgctgagtcaaagattcttcttgaa
gacatatcaaagatgatagcctctcattaa
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