Vicia villosa (hairy vetch): 131605643
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Entry
131605643 CDS
T09680
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131605643
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
131605643
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_RFWD3
WD40_like
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
131605643
NCBI-ProteinID:
XP_058733962
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Position
LG1:48007484..48011840
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AA seq
468 aa
AA seq
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MVEEREALVACSDQSMRIGVTIWDMKTGEKIIHIPTCSSPPFGLLCLRNQFLVASQLNKH
GSMGGGSIVVWPLNKPHQPIMNNTVEAIGPISCTKDGIYLVGGGLSGNAYIWNVINGKLL
KTWAAHYKSIKHIMFSNDDSLLVSGSADGMLCVWSMISLLDVEESESYNPLLHHLPGHMS
SITGLLAIPCNCYSFIISSAIDGTCKVWDFITGKLVQTQGYPLAITCIALHEGESLLFCG
TENGTIFVNKLDIGLEDGFNSIIRGDQSLELKGHSGAIIALTSSRTSLISSSEDCTICIW
DVINWTITRRFNLEKGKVTNLVVILRSSALSTSNHTRGSNQYNISPLGKSPLQINGHSET
TSLNSLCRLFKEKQTHIDLRSTGLLRQSIYGPQKAHVSMAMTMQMKVDKNIENRSWATKM
AKHVMVINRKMQSRLLDLIHRRLFCTNKINSQKRGMVSMKQRKGIKKP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagaacgagaggcattggtagcatgcagcgatcaaagcatgagaattggagtg
acgatatgggacatgaaaacaggagaaaagattatccatataccaacatgttcttcacca
ccttttggtttgttgtgtttaagaaatcagttccttgtggcatcacaattgaacaaacat
ggatctatgggtggtggatccattgttgtatggcccttgaacaagcctcatcaaccgatt
atgaataacacagtggaagccattgggccaatttcttgcacaaaagatggcatatacctt
gtgggaggtggtttatctggaaatgcttatatttggaatgtgattaatggaaaattgttg
aagacttgggcagctcattacaaatctataaaacacataatgttttcaaatgatgattct
cttcttgtttctggttcagctgatggcatgttgtgtgtttggtccatgataagtttgtta
gatgtggaagaatcagaaagctacaatcctttattacatcatttgccagggcatatgtcc
tcaataacaggccttttagctataccttgcaattgttattcatttataatatcaagtgct
attgatggaacatgcaaggtttgggactttatcactggaaagcttgtgcaaactcaaggc
tatcctttggcaataacttgcattgcccttcatgaaggtgaaagtcttttgttttgtggt
acagaaaatggaacaatatttgtcaacaaacttgatattggtttggaagatggttttaat
tcaattattagaggagatcaatcacttgaactcaaaggacacagtggagccattattgca
ttgacatctagtaggacaagcctaatatcttcttctgaagactgcacaatatgcatatgg
gatgtcatcaactggacaatcactcgaagatttaatcttgaaaaagggaaagtaactaat
ctcgtggtaatacttcgatcttcggctctctccacatcaaatcatacaagaggctccaat
caatacaatatctctccattgggcaagtctcctctacaaatcaatggacacagtgaaact
acatctcttaattctttgtgtcgcctcttcaaagaaaaacaaactcacattgatttaaga
agcactggcttattgagacaaagcatttatggtccacagaaagcacatgtgtctatggcc
atgaccatgcaaatgaaagtggacaaaaatattgagaatcgttcatgggcaacaaagatg
gcaaaacatgttatggtgataaacagaaagatgcagtcacgactgttggacttgatacat
cgtagattgttttgcactaacaaaataaactctcaaaaaagaggaatggtgagtatgaag
caaaggaaagggatcaagaagccataa
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