Vicia villosa (hairy vetch): 131609830
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Entry
131609830 CDS
T09680
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03015
mRNA surveillance pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131609830
09122 Translation
03013 Nucleocytoplasmic transport
131609830
03015 mRNA surveillance pathway
131609830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131609830
03041 Spliceosome [BR:
vvo03041
]
131609830
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
131609830
Spliceosome [BR:
vvo03041
]
Common components
Common spliceosomal components
Cap binding complex
131609830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
TPR_MLP1_2
DUF4407
Motif
Other DBs
NCBI-GeneID:
131609830
NCBI-ProteinID:
XP_058737621
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All DBs
Position
LG6:complement(123571556..123586791)
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AA seq
864 aa
AA seq
DB search
MSSWRSLLLRIGDKSPEYGPSSDFKDHIETCFGALRRELEHSETEILEFLLTCAEQLPHK
IPFYGTLIGLINLESEDFVKRLVEKTHSKFQEALDTGNCNGIRILTRLMTVMMCSKALQP
NSLVGVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQIPEDIERV
MVGIEAYLSIRKHTSDTGLSFFENDDEIERDINNKDFLEDLWDRIQVLSSNGWKVESVPR
PHLSFEAQLVAGKSHEFGTISCSNLPNPPSVPSGVSFGKEKHEAELKYPQRIRRLNIFPS
SKMEDMQPIDRFVVEEYLLDVLLYFNGSRKECASFMVGLPVTFRYEYLMAETIFSQLLML
PQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPK
GGPNFNLVAEDGKENNEQLLSGNLNDMVKGKAPVREIISWIDESVSSNNSLEVTLRVVIQ
TLLNIGSKSFTHLITVLERYGQVIAKICPDEDKQIMLIAEVGSFWKSNTQMTAIAIDRMM
GYRLISNLAIVRWVFSEDNVEQFHLSDRPWEVLRNAVSKTYNRISDLRKEISSLKRNISS
AEVAANEAKTELDVAESKLALVDGEPVVGDNPVRMNRLKSRAEKAKEELVSIQDSIEAKE
ALLARATDENEALFLLLFKSFSNVLTDRLPKGAGARTLHEWKSAQVEEMAVDLEEQSTME
VDTENQIPQNSQSNGGKKSVAYNVGEKEQWCITTLSYVKAFSRQYATEIWAHIEKLDAEV
LTEDAPPLFRSAVCFGLRRPIIEA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttggagaagccttcttctacggatcggcgataagagccccgaatatggacct
tcttccgacttcaaagaccacattgaaacgtgttttggtgcgcttcgtcgtgagctcgaa
cactccgaaactgagattttggagttccttcttacatgcgctgagcaattgcctcacaag
attccgttctatggaaccctgattgggttgattaacttggaaagtgaggattttgtgaaa
agactggtggagaaaactcattctaaatttcaggaagccttagatactggaaactgcaat
ggaattcgtattttaacgaggctgatgactgttatgatgtgcagtaaagctcttcaacca
aactctctagttggtgtctttgaaacatttttgtcatcagctgccaccacagtagacgag
gaaaaagggaatccgttatggcagccatgtgctgacttttatataacttgcattttatca
tgcctaccgtggggtggggctgaacttgttgagcaaattcctgaagatattgagagagta
atggttggtatagaagcttatttgagcatccgaaagcatacttctgacactggtttatcc
ttttttgagaatgatgatgaaatcgagagagatattaataacaaggattttttggaggac
ttatgggatagaatacaagttttatcaagcaatggatggaaagttgaaagtgttccaaga
ccccatctttcctttgaagctcagctggttgctgggaagtctcatgaatttgggacaata
agctgctccaacttaccaaacccgccttcagttccttctggtgtatcttttggtaaagag
aagcatgaggcagaattaaagtatcctcaaagaatacgacggttaaatatatttccttcc
agtaaaatggaggatatgcagcctatagatcgatttgtggtggaagagtatctcttagac
gtgcttctgtatttcaatggcagtcgaaaggaatgtgcttctttcatggttggtctgccg
gttaccttcagatatgagtacctcatggctgagacaatattctctcagctgctgatgctt
ccacaaccacctttcaaaccagtgtattacacactggtaattattgacctctgtaaggct
cttccaggagcttttcccgcagttgttgcgggagcagttcgtgctctctttgaaaagatt
gctgatttggatatggagtgccgaactcgactaatcctttggttctcacaccatttatca
aacttccagttcatttggccttgggaagagtgggcttatgtgttagatctccctaggtgg
gctcctcaacgtgtttttgttcaagaagttttggagagggaagttcgcttgtcatactgg
gacaaagtcaaacagagcattgaaaatgcacctggcttagaagaattgcttcccccaaag
ggtggaccaaatttcaatcttgttgcagaagatggtaaagaaaacaatgaacaattgctg
tctggaaatctcaacgacatggttaaagggaaggcacctgtccgtgaaattatctcatgg
attgatgaaagcgtgtcttcaaataatagtctagaagttacactcagagttgtcatacaa
actcttctcaatattggatccaagagtttcactcatttgataactgtattagaaagatat
gggcaagtcattgctaaaatatgtccagatgaagataagcaaattatgctgatagctgaa
gtcggttctttctggaagagtaacacacaaatgacagcaatagcaattgaccgaatgatg
ggctatcggcttatatcaaatttggctattgtgagatgggtcttctctgaagataatgtt
gagcaatttcatttgtcagatcgtccatgggaggttcttagaaatgcagtaagcaaaaca
tacaaccgtatttctgatctaaggaaagaaatatcatctcttaaaaggaatatttcatca
gctgaagtagctgccaatgaggcgaaaacagagctagatgtcgcagagtccaaactagca
ctcgtggacggtgagccagttgtcggtgacaatcctgtaagaatgaatagattgaaatca
cgtgctgaaaaagcaaaggaagagctggtatctatacaagattctatagaagctaaagag
gctcttcttgcccgagcaactgatgaaaatgaggcattgtttctcttgttgtttaaaagc
ttctcaaatgtattgactgatcgccttcctaagggggctggagctagaacacttcatgaa
tggaagtctgcccaagttgaagagatggcagttgacctcgaagaacagtcaacaatggaa
gtagacactgagaatcagatacctcaaaacagtcagtcaaatggtgggaagaaaagtgtt
gcttataatgtaggtgaaaaggagcagtggtgtatcactactttgagttatgtgaaggcc
ttttctaggcagtacgctactgagatatgggcccatattgaaaagttggacgcagaggta
ttgacagaagatgcacctcctctttttcgatcagctgtttgttttggtcttcgaagacca
attatcgaggcttga
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