KEGG   Vicia villosa (hairy vetch): 131609947
Entry
131609947         CDS       T09680                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131609947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvo03019]
    131609947
Messenger RNA biogenesis [BR:vvo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     131609947
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 131609947
NCBI-ProteinID: XP_058737766
LinkDB
Position
LG6:127592992..127599798
AA seq 617 aa
MDFNHHLSDLSTSTQALPSDDDFRFHYNSSEFRHLIEEIARKSQSMLNQIGSSENIWGLG
SSFPADIDDAYEWIVNANDDALELVDEIVDEFHRVLKEQDMEEGEDGFFKMKKGTKWLGF
LGGEANGKKPKVSFHVHTLRKPQYHYNLAVDNSNQPFEHVWLEKSEDGQRFIHPLEKLSV
FDFVDEDDIESLVPVMPPPLECTPFKLVEDVKGLMELADKLSSVNEFAVDLEHNQYRSFQ
GLTCLMQISSRTEDFIVDTLKLRDHVGTHLREFFMDPTKKKVLHGADRDIVWLQRDFGIY
VCNMFDTGQASRVLKLERYSLQHLLQLYCGVTANKEYQNADWRARPLPDVMIKYGREDTH
YLLYIYDVMRIKLFELSKESESSDPLLEVYERSYNVCMKLYEKEPLTEDSYLNLKGLRGA
GFNGQQLAVVSGLFEWRDVLARSEDESTGFILPNKVILEIAKQMPVTTSNLRRLVAERSR
LPYVERNHDIIINIVRHSMQKAAAFEEAALRLKEEHAAFEEAALRLKEENAASENGANVQ
LQIMPTGAYGATPPGHPVSEGNGFPDKKGKKKIKVEQIVASETSDPKKPLSATVSTSTLD
ANIILDLDSDSDDILQE
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggacttcaaccaccacctctcagacctttccacttccacacaagcccttccctccgac
gacgacttccgcttccactacaactcctccgaattccgacacctcattgaagaaatcgcc
agaaaatcccaatcaatgctaaaccaaatcggttcctccgagaatatctggggtctaggc
tcctctttccccgccgacatcgatgatgcttacgaatggattgttaatgcaaacgacgac
gctttggagcttgttgacgagattgtggatgagtttcatagggttctgaaggagcaggat
atggaggaaggggaagacgggtttttcaagatgaagaaggggacgaaatggcttggtttt
ttgggtggtgaagcaaatggaaagaaaccgaaagtgtcgtttcatgtacacactcttagg
aagcctcagtatcattataaccttgcggttgataactctaatcaaccttttgaacatgtt
tggttggaaaagagtgaagatggtcaaaggtttatacatccgctggaaaaactctctgtt
tttgattttgttgatgaagatgatattgagagtcttgtaccagtaatgcctcctccactg
gaatgcacacctttcaagcttgtggaggatgtcaaaggattaatggagttggctgataag
ctgagctctgttaatgaatttgcggtggatttggaacataatcaatatcggtcttttcaa
ggtttgacttgtttgatgcaaatatcaagccgaactgaagattttattgtggatactctg
aagctccgggatcacgttggaactcatctgagggagtttttcatggaccctaccaagaaa
aaggtattgcatggagcagatagagacattgtgtggctgcaacgggattttggcatttat
gtctgtaatatgtttgacactggccaggcttctagagtgttaaaattggagagatatagt
ttgcaacatcttttgcaactctattgtggggtaactgcaaacaaagagtaccagaatgca
gactggagagcacgcccccttcctgatgtgatgataaagtatggaagagaagatacacac
taccttctttatatatatgatgtaatgaggatcaagctatttgaactgtctaaggagtcg
gaaagttccgatcctctgttggaggtttacgagaggagttataatgtctgcatgaagctg
tacgagaaagagcctttaacagaagactcctaccttaatctaaaagggttgcgaggggct
ggttttaatggtcagcagcttgctgttgtttcagggctttttgaatggcgtgatgttctt
gctcggtcagaagatgaaagtactgggtttatattgccaaataaagttattcttgaaatt
gctaagcagatgcctgtcactacaagtaatctacggcgattagtagcggagaggtcaagg
ctcccatatgttgagcgcaatcatgatatcattattaacattgtcagacattctatgcaa
aaggctgctgcctttgaagaagctgcacttcgtttgaaagaagaacacgctgcctttgaa
gaagctgcgcttcgtttaaaagaagaaaatgcagctagtgaaaatggtgcaaatgttcag
ttgcaaataatgccaacgggtgcttatggtgcaactccgccgggccatccagtttcagaa
gggaatggttttcctgacaaaaagggcaagaaaaagatcaaggtagaacagattgtagca
tcagagacatcagatccgaagaaacctctttcagctacagtttccacatctaccctggat
gcaaatataatattagacttggattcagactcggacgatatattgcaagaataa

DBGET integrated database retrieval system