Vicia villosa (hairy vetch): 131609956
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Entry
131609956 CDS
T09680
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131609956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131609956
03016 Transfer RNA biogenesis [BR:
vvo03016
]
131609956
Enzymes [BR:
vvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
131609956
Messenger RNA biogenesis [BR:
vvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
131609956
Transfer RNA biogenesis [BR:
vvo03016
]
Prokaryotic type
tRNA degradation factors
131609956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
131609956
NCBI-ProteinID:
XP_058737780
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All DBs
Position
LG6:complement(127776119..127803296)
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AA seq
938 aa
AA seq
DB search
MLACTNSIFHGPTTFHRQSQPSKFLLSKPLLFPPLPRVVNFRKLKFHSPFSGKNSCRRFD
VKSSVDSSSGVLESIDISVPHSSLQKHSVKIPVGDRHILVETGHMGRQASGSVTVTDGET
IVYTTVCLDDTPSEPSDFFPLSVNYQERFSAAGRTSGSFFKREGKTKDHEVLICRLIDRP
LRPTMPKGFYHETQILSWVLSYDGSHAPDSLAITAAGIALALSEVPMSKAVAGVRVGLIG
DKYIVNPTTEEMENSELDLMLAGTDSAILMIEGYGNFLPEEKLLKAVEVGQDAVRAICNE
VEALVKKCGKPKMIDAIKLPPSELYKHVEEIAGDELVKVLQIRNKIPRRKALSSLEERVL
KILTENGFVIDESAPRSNAETIAEILEDEDEDEVIVDGEVDEGDVHIKPTPRKPTPLFSE
VDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPKEIRPINSSCSILPRAHGSALFTRGETQA
LAVATLGDNKMAQRIDNLIEVDDYKRFYLQYSFPPSCVGEAGRIGAPSRREIGHGMLAER
SLETILPADKDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGIAMGLV
LDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVAGITLPIMREAL
LQARDGRKHILGEMMKCLPPPAKSLSKYAPLIHIMKVRPDRINLIIGSGGKKVKSIIEQS
GVEAIDTEDNGTVKIFAKDLASLEKSKAIISNLTMVPNIGDIYRNCEIKTVVPYGVFVEI
APGREGLCHISELSSGWLAKAEDVFKVGDHIDVKLIEINEKGQLRLSHRALLPDADSDSS
NSTDKGSLEEVTGLTNAGLFEEKTEQPNDKVNTPKGTASSKRSSEDNSVLPSKKFIRRSV
SPSQEKPVTNKDKIKKSSNKTVSSVSSKGESSLVGEEA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgctagcatgtactaacagcatcttccatggccctaccacattccaccgccaatcccag
ccttctaaattcctactctctaagcctcttctcttccctcccctccctcgcgtagtcaat
ttccggaaattaaagttccattctccgttttccggtaagaatagttgccgccgtttcgat
gttaaatcttcggttgattcatcgtcaggagttttggagtccattgatattagtgtcccg
cacagctccctgcaaaagcattccgtgaagattcctgttggcgatagacatattttggtt
gagactggtcacatgggaaggcaagcaagtggttctgttacagttacggatggggagacc
attgtgtacaccactgtttgtttggatgatactcctagtgagccatccgattttttcccc
ctttctgtgaattatcaagagcgtttttcagctgctggtcgcactagtggaagtttcttc
aaacgagaaggaaaaacaaaggatcacgaggttcttatttgtagattgattgataggcct
ctgcgtcctactatgcctaagggattctaccatgaaactcaaatattatcttgggtttta
agctatgatggatcgcatgcccccgattccttagccatcactgctgctggtatagcactt
gcactttcagaagtgcctatgtcaaaagcagttgctggagttcgagttggcctcattggt
gataagtatatagtaaatcctacaactgaagagatggaaaactctgagttggacctcatg
ctggcgggcacagatagtgcaatattgatgatagagggttatggcaattttcttccagaa
gagaagttacttaaagctgtagaagtcggtcaggatgcagtgcgagcaatctgtaatgag
gtagaagccttggtcaagaaatgtgggaagccaaagatgattgatgccatcaagttacct
ccttctgagctttataaacatgttgaggaaatcgctggtgatgagttggtaaaagttctt
caaattagaaataaaataccaagaaggaaagccctatcatcattggaagaaagggttctt
aagatactgacagaaaatgggtttgtcattgatgaatcagcaccgaggagtaatgctgaa
acaatcgcagagattcttgaggatgaggatgaagatgaagtaattgttgatggtgaagtt
gatgaaggcgatgttcatataaagccaactccacgcaaaccaacgcctttattttctgag
gtagatgtgaagttggtatttaaagaagttacatccaagtttttgaggaaacgcatagta
gagggtgggaaaaggagtgatgggagaacaccaaaagaaatccgcccaattaactcaagt
tgtagcatattacctagagcacatggaagtgctctttttacgaggggcgaaacacaggca
ctggctgttgctacgcttggagataacaagatggcacaacgaatagacaatcttatagaa
gttgatgattataagaggttctatctgcagtattcgtttcccccttcatgtgttggggag
gcgggccgtattggtgcaccgagtagaagagaaattggtcacggaatgcttgctgagaga
tctcttgaaacaattttgcctgctgataaggacttcccttacactattcgtgttgaaagt
accatcacagaaagcaatggctcttcgagcatggcgtctgtttgtggaggttgcttagca
ttgcaagatgctggggttcctattaagtgctcaattgctggaattgctatgggtttggtt
cttgacaccaaggaatttggtggagatggaaccccgcttattctgtcagacataactgga
tctgaagatgcatctggcgatatggattttaaggttgctgggaatgaagatggcataact
gcatttcagatggacattaaggttgctggaattactttgcccataatgagagaagcactg
ctacaggcaagagacggcaggaagcatatacttggagaaatgatgaaatgcttgccccct
ccagccaaaagtctttccaagtatgctcctttgattcacattatgaaggtcagaccggat
agaataaatcttataattggctctggtgggaaaaaagtgaagagcattattgagcaatct
ggagtagaggctattgataccgaagataatggcactgtaaaaatatttgcaaaagatttg
gctagtttagagaagtctaaggctatcattagtaatttgacaatggttccaaatattggt
gatatatataggaattgtgaaattaaaacagtagttccatatggagtttttgtagagata
gcacctggacgagagggactttgccatattagtgaactgagttcaggttggctagctaag
gcggaagatgtgttcaaggtcggagatcatattgatgtaaaacttatagagataaatgaa
aagggacagctgcgccttagtcaccgagcattgcttcctgatgcagattcagacagttca
aactcgactgataagggttcattggaagaagtaaccggcctgacaaatgctggtttattt
gaagagaaaactgaacagcctaatgataaggttaacacacccaagggcacagcctcatct
aaaagaagttcagaggacaattccgtacttccatcaaaaaagtttatcaggagatcggta
agcccttcccaggagaaacctgtcacgaacaaagacaagataaagaagagcagcaacaaa
acagtcagtagtgtctctagcaaaggtgaaagtagtttggttggtgaagaggcataa
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