Vicia villosa (hairy vetch): 131610155
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Entry
131610155 CDS
T09680
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131610155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131610155
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131610155
Spliceosome [BR:
vvo03041
]
Complex C
Other components
Step II factors
131610155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
ResIII
AAA_30
PhoH
ABC_tran
SLFN-g3_helicase
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
131610155
NCBI-ProteinID:
XP_058738014
LinkDB
All DBs
Position
LG6:136654660..136662554
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AA seq
697 aa
AA seq
DB search
MPWGARGNHQPSANGNDNGKFSNANRNRQNHSSPWKQKIVQQRKSLPIASVEKRLIEEVR
KNDILIIVGETGSGKTTQIPQFLFDAEFCRDGKVIGITQPRRVAAVTVAKRVADECGVEL
GQKVGYSVRFDDSTSNSTRIKYMTDGLLLREALLDQYLSKYSVIIVDEAHERTVHTDVLL
GLLKRVQVARSNSIGDGRNLNNGNKSSPLKLIIMSASLDARTFSEYFGDAKAVHIQGRQF
PVDLFYTRLPETDYLDAALITIFQVHLGEAPGDILVFLTGQEEIEAVERLINERLTKLPE
GSQKLLPVPIFAALPSEQQMRAFSPAPSGFRKVILATNIAETSITIPGIKYVIDPGLVKA
RSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPEIKRC
NLANVILQLKALGVDDILGFDFIEKPSRTAIVKSLEQLFLLGALTDDCQLSDPVGWQMAR
LPLDPIYSKALILASEYDCLEEMLITVAMLSVESIFYTPRDQYEEVRAATKCFASPEGDH
ITLINVYRAAIELLQKRTLDTNKAKSEKVLRKWCKENFINSRSLRHARDIHRQIKGHAQQ
MGLKLASCGDDMLQFRRCLVASFFLNAAVKQPDGTYRALASGEVVQIHPSSVLFRKKPEC
IIFNELIQTTNKYVRNLTRVDHLWLTELAPKFYAMQN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccttggggggctcgtggaaatcaccaacccagtgctaatggcaacgacaacggaaaa
ttctccaatgcaaatcggaataggcaaaaccattcttctccctggaaacaaaagattgtg
caacagaggaagtctcttcctattgcttcggttgagaagagattaattgaagaggttcgg
aagaacgatattttgattattgtcggtgaaactggaagtgggaaaactacacagattcca
cagtttttatttgatgctgaattttgccgcgacggaaaagttattggaataactcagcct
agacgtgttgctgctgtcactgtggccaaacgagttgctgacgaatgtggtgttgagttg
ggccaaaaggttgggtactctgttagatttgatgattctacttcaaactcaacaaggatc
aagtatatgacagatggattgcttctgagggaagcattactggatcagtatctttctaag
tattctgttataattgttgatgaagcacatgagagaaccgtgcacactgatgtcttgttg
ggattgctaaaacgtgtgcaagttgctcgttcaaattctatcggtgatggtcggaacctt
aataatgggaataagagttctccgttgaagctaatcatcatgtctgcaagtcttgatgct
cgcactttctctgagtactttggtgatgccaaagctgttcacatccaagggagacagttt
cctgtggatttattttatactcgtcttccagaaactgattatttagatgctgccttgata
acgattttccaggttcatctaggcgaggcccctggtgatatactagtatttctgaccggg
caagaggagattgaagctgttgaaaggcttatcaatgagcgacttacaaagttacctgaa
ggaagtcagaagcttctacctgtgcctatatttgcagctcttccatctgagcagcaaatg
cgagccttttcaccggctccatctggatttcgcaaggtgatattggcaactaatattgct
gagacgtcaattacgattcctggaatcaagtatgtaattgatcctggacttgtaaaagcg
cgttcctatgatcctggaaaaggcatggaatctttgatcgtagtacctacatccaagtcc
caggcactgcaaagaagtggacgtgcagggcgtgaaggacctggaaaatgctttcgtcta
tatccagaaaatgaattcgagaaacttgaggactctacaatgccagaaattaagcgttgc
aaccttgctaacgtgattttgcagcttaaggctttgggtgttgacgacatattaggattt
gatttcattgagaaaccttcaaggacagctattgtaaaatcactggagcagctattttta
ttaggtgctttaacagatgactgtcaactatctgatccagttggatggcaaatggctcga
ctacccttggatcctatttattccaaagctcttattttagctagtgagtatgactgcttg
gaagaaatgttgataactgttgcaatgctttctgtggaatcaatattttatactccgcgt
gaccagtatgaagaggtaagagctgccactaaatgcttcgcaagtccagagggagaccat
attactttgattaatgtgtatagagcagctattgaattattgcagaagagaacattggac
acgaataaagcaaaaagcgaaaaagttttacgaaaatggtgcaaagaaaattttatcaat
agccgttctcttagacatgctcgtgacattcataggcagataaaaggacatgctcaacaa
atgggtctgaaacttgcttcttgtggagatgatatgcttcaatttcgcagatgccttgtt
gcttcctttttcctcaatgcagctgtgaagcagccagatggaacctacagggctttggca
agtggtgaagtggtgcagatccacccttcttctgtattgttccggaaaaaaccagagtgc
attatatttaacgaactgatccaaactactaacaagtatgttcgcaatttaaccagagtt
gaccacctctggttaactgaactggctcctaagttttatgccatgcagaattaa
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