Vicia villosa (hairy vetch): 131610290
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Entry
131610290 CDS
T09680
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131610290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131610290
Spliceosome [BR:
vvo03041
]
Common components
Common spliceosomal components
SR proteins
131610290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
131610290
NCBI-ProteinID:
XP_058738175
LinkDB
All DBs
Position
LG6:142388871..142392237
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AA seq
312 aa
AA seq
DB search
MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKHDYAFVEFSDPRDADDA
RYNLDGRDVDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDC
KAGDWKNKCYRCGERGHIEKNCKNSPKKLSSRHARSVSRSPGRSRSPRRGRSRDRSYSPA
RSYSRSRSPVRSRSPVRSRSPVRRDRSPVPDDRSRSPPPSKSRKYSRSPEGSPQRSASPS
NDKVVTAQDGSDYSDGPRVKSRSPSRDNDDSPKANGRSRSRSRSRSPSRSPRDEDRSPVE
DDDDTTRRSPSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgataagtacggcaatactcgcctctatgtgggtcgtctgtcttcc
cgaactcgctctcgtgatcttgagagagtcttcagccgatatggaagagttcgagatgtg
gatatgaagcatgattacgcctttgttgaatttagtgatcctcgagatgcggatgatgca
aggtacaacttggatgggcgtgatgttgatggaagtcgtcttattgtggaatttgctaaa
ggggttcctcggggttctcgtgattctcgggattctcgagaatatcttggtagaggtcct
cctcctggctctggacgctgctttaactgtggcattgatggccactgggctcgagattgc
aaagctggggattggaagaacaagtgttatcgctgtggggagagaggtcacatagagaag
aactgcaagaacagtcccaaaaagttgagcagtagacatgcacggagtgtttcacgctct
ccaggaaggtcacgctctcctaggcgtggcagaagccgggatagaagctacagcccagcc
cgcagctatagccgatcaagatctcctgtcagatctcgatcgcctgtcagatcaagatct
cctgtcagaagagatcgaagcccagttccggatgacagatctaggagccccccaccttcc
aagtcaaggaagtatagtagatctcctgaaggtagtcctcaaaggagtgcatctcctagt
aatgataaggtggtcactgcccaagatgggtctgattatagtgatggtcctagagtgaaa
agcagaagcccttcaagggacaatgatgacagccctaaggctaatggaagaagtcgcagc
agaagccgcagcaggagtcctagccgcagtcccagggatgaggataggagccccgtggag
gatgatgatgacaccactcgtcgctctccatcaccttaa
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