Vicia villosa (hairy vetch): 131610440
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Entry
131610440 CDS
T09680
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131610440
03036 Chromosome and associated proteins [BR:
vvo03036
]
131610440
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131610440
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
131610440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
HTH_44
HHH_9
Tex_central_region
HHH_3
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
131610440
NCBI-ProteinID:
XP_058738376
LinkDB
All DBs
Position
LG6:complement(148998906..149005523)
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AA seq
1396 aa
AA seq
DB search
MSHFIVDEEEEEVDENGAPERTKKPKGVRRPMAPGVSSSSLQEAHELFGDVDELLLARNH
IRGSNDYKETRLEDEFEPIVLSDKYMTENDHRIRDLDIPERMQISEESTGAPSLDGSSID
EEGRWIVTQLKNGEVPWIHKKDSREELPIDKDDIVRFLELHHVQKLDIPFIAMYRKEKCL
SLLKDLEQLEAGDDNFDMNNKTPTLKWHKILWALQDLDKKWLCLQKRKSALQLYYNKRFG
EESRCVYDETRLNLNRKLFDSVMRSLKEAESKREVDDAVSMFNLHFPPGEASVDEGQYRR
PKRKSMYSTFSKAGLGEVASRFGCSSEQIGLCLSVVQLHELEDPKETPQELASNFTSAMY
DTPEKVLKCARHMAAVEITCEPSIKKHVRRCFIDHAVVSTSPTADGNMTIDSFHQFSGVK
WLREKPLFKFEDAQWLLIQKAEEDKLIQVTIKLPDEYLNKLIDQFKEYYVSDSVSRSAQM
WNEQRKLILHDAIFQFLLPSMEKEARVVLANKAKHWVLMEYGKALWNKVSVGPYQQQKEN
DLTLDDVAAPRVMACSWGPGKPQTTFVMLDSSGEVQDVLHTGSLTQRSQNVHDQQRKKSD
EKRVLKFMTDHQPHVVVLGAANLSCPRLKEDIYEVIFKMVEENPRDVGHEMDRLSIVYGD
ESLPRLYENSLISSEQLPSQQLGIVRRAVALGRYLQNPLAMVATLCGPRKEILSWKLSPL
ESFLNLDDKIGMVEQVMVDVTNQVGLDINLATSHEWLFAPLQFISGLGPRKAASLQRSLV
RAGSVYTRKNFLTEHQLGKKVFVNSVGFLRVRQSGLAASSSQFFDLLDDTRIHPESYILA
QELAKDLYKEDGTGDATDDDDALEVAIEHVRDRPSYLKNLDVEEYAVGKLRQDKIKTFYD
IKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKVVQVTVHRVQAEKAICRLES
GMTGILMKEDFADDWRDIIELSNRLHEGDILTCKIKSIQKNRYQAFLLFKESGMRSDRVH
NNHNFDPYYHEEQSSLPSEQDKTQKQKDAKKHFNARMIVHPRFHNLTADEATKFLSDKDP
GESIFHPSSLGPSYLTLTLKIHDGVYAHKDIVEGGKKLKDITSLLRIGNTLKIEDDTFED
LDEVIDRYIDPLVTHLKTMLNYRKFRTGTETKVEELLRIEKAEYPMRIVYSFGISLKHPG
TFILTYIRSTNPHHEYIGLYPKGFMFRKKMFKDIDRLVAYFQRHVDDRKNDSVASVKSVA
AMVPIRSSATGCSSGASVGSGWGGSNSKCGSRTGRPDYRNNGNRDERPSGMPRPYGCGSY
NSSSRGHSNHGATRWGSAIKDRDDSLSNFPGLRFKIPLVVGELDSRKLLKVDALETGSND
MNFFLTRTFSGPFIIT
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacttcattgtggacgaagaagaagaagaagttgatgagaacggagcccctgag
aggactaagaagccaaagggtgtaagaaggcctatggcaccaggagtctcctcctcctct
ttacaagaggctcatgaattatttggcgatgtcgatgaacttcttttggctcgcaatcat
attcgaggatcaaatgattataaagagactagacttgaagatgagtttgagcctattgtt
ctctctgacaaatatatgactgagaacgatcaccgcattagggacctcgacattcctgag
agaatgcagatatctgaggagagtaccggtgctccttcacttgatggaagcagtatagat
gaagagggtcggtggatagttactcaacttaaaaatggggaagtcccttggattcacaag
aaagattcaagagaggagctaccgattgacaaggatgatatcgtcagatttttggaactg
catcatgtgcaaaaattagatattccttttattgccatgtatcgaaaggagaagtgttta
agcttattgaaagacctagagcaacttgaagctggtgatgataattttgatatgaataac
aagacacctactctaaaatggcacaagatactttgggctctacaggacctggacaagaag
tggttgtgtcttcagaagcggaagagtgccctccaattatactacaataaacggtttggc
gaagagtcacgttgtgtatatgatgaaacaagactgaacttgaataggaaattgtttgat
tcagttatgagatcactgaaagaggcggaatctaagagggaggttgatgatgctgtttcc
atgttcaacttgcatttcccacctggtgaagccagtgttgatgaaggacagtacagaagg
ccaaaacggaagtcaatgtatagcactttcagtaaggcgggtctgggggaggttgcaagt
aggtttgggtgtagctctgagcaaatcgggttatgtttatctgtagttcagctgcatgag
ttggaagatccaaaggaaacaccacaagagttggcttctaacttcactagtgcaatgtat
gatacacctgaaaaagtacttaaatgtgctaggcatatggcagctgttgagataacttgt
gagcctagcataaagaaacatgttcgtagatgctttattgaccatgctgtggtgtcaacc
tctcctactgccgatggaaatatgaccatagattcgttccatcagttttctggggtgaag
tggctgcgagaaaagcctttgtttaaatttgaggatgcccaatggctccttatacagaag
gcagaagaagacaaactcatacaagttactattaagcttcccgatgagtatcttaataag
ttaatagaccaattcaaagagtattatgttagtgatagtgttagcagatctgctcaaatg
tggaatgaacagaggaagctcatactgcatgatgcaatttttcaatttcttttaccatca
atggaaaaagaagcaagagtcgtcctagcaaacaaagcaaagcattgggtgcttatggag
tatgggaaggccttgtggaataaggtttctgtggggccttatcaacaacagaaggaaaat
gatcttaccttggatgatgtggctgctcctagggttatggcatgctcttggggccctgga
aagccacagactacttttgttatgttagattcatctggagaagttcaagatgtgctacac
actgggtcgcttactcaaaggtcacagaatgtccatgaccaacaaaggaaaaagagtgac
gagaaacgtgtgttgaagttcatgacagatcaccaacctcatgttgtggtattaggagcc
gctaacttgtcttgccctcgcttgaaagaagacatatatgaggttatttttaagatggtc
gaggaaaatcctagagatgttgggcatgaaatggacaggctcagcattgtgtatggcgat
gaatctctgcctcgtctttatgaaaattctctaatttcttctgaacaacttccttcgcag
caactaggtatagtgaggcgggctgttgctcttggaagatatctccagaacccgttggca
atggttgcgacactatgtgggcccaggaaggaaatattgtcatggaagctgagccctttg
gagagttttctcaacctggatgataaaattgggatggttgagcaggttatggtagatgtg
accaatcaggttggcttagacattaatttagcaacaagtcacgaatggttatttgctccg
ttacaatttatttcggggcttggtccccggaaggctgcatccttgcagagatcgctggtt
agagccggctcagtttatacccggaagaactttttgacagaacaccaacttggtaaaaaa
gtatttgtcaattcggttggtttcttgcgtgtccggcaaagtggattggccgcctctagc
agccaattttttgatttgctggatgatacacgaattcatccagaatcgtatattcttgct
caggagctggccaaagatttgtataaggaagatggcacaggtgatgcaactgatgacgat
gatgccctagaggtggccatagaacacgtgagagatcgacctagttatttgaaaaacctc
gacgttgaggaatatgctgttggaaaacttcgtcaagacaaaattaaaactttctatgat
ataaagagagaattgattcaagggtttcaggattggcgtaagcaatatgaagaaccaagt
caggatgaggagttttatatgatatcaggtgagacagaagagactcttgctgaaggtaaa
gtggtccaggttacagttcaccgagttcaagccgagaaagcaatatgtaggcttgaatct
ggaatgactggaatccttatgaaagaagactttgcagatgactggagagatataattgaa
ttatctaataggctacatgaaggtgacatactcacttgtaaaatcaagtcaatccaaaag
aacaggtatcaagccttccttctttttaaagaaagtggaatgagaagtgatcgggtgcat
aacaaccacaattttgatccctattaccatgaagaacagagctccttgccgagtgagcaa
gacaaaactcagaaacaaaaggatgcaaaaaaacatttcaacgcaaggatgattgttcat
ccacgatttcataaccttactgctgatgaagcaaccaagttcttgtcagacaaagatcct
ggtgaaagtattttccatcctagttcactgggtccttcataccttactttgactcttaaa
attcacgatggagtatatgctcacaaagatatagttgaaggtgggaagaaactgaaggac
atcacaagcttacttcgaataggaaatacacttaaaattgaagatgacacttttgaggat
ttagatgaggttatagaccgatatattgatcccttggtgactcacttaaaaacaatgtta
aattatcgcaagttcaggacgggcacagaaacaaaagttgaggagcttttgaggatcgaa
aaggcggaatatcccatgcgcatagtttatagttttggcatctctcttaaacatccaggc
acatttatattgacttacattagaagtactaatccacaccacgagtacattggtctttac
cccaaaggattcatgttccgcaaaaagatgttcaaggatattgaccggcttgtggcatat
tttcaaaggcacgttgatgatcgaaaaaatgattcagtagcttccgttaaatctgtagct
gcaatggtaccaatccgaagctctgcaactggttgctcatcaggggcatccgtggggagt
ggctggggtggttcaaacagcaagtgtggttccagaacaggacgacctgattacagaaac
aatgggaatcgagatgaacgccctagtggaatgcctcgtccatatggttgtggttcttat
aacagtagcagtagaggacacagcaatcatggcgcgaccaggtggggatctgctataaaa
gacagggatgatagtttaagcaacttcccagggctaaggttcaaaattcccctggtggtt
ggggaactggactcaagaaagctgttgaaagtggatgctctcgaaactggatcaaatgat
atgaatttctttctcacaagaacatttagtggacctttcattattacatag
DBGET
integrated database retrieval system
