Vicia villosa (hairy vetch): 131610791
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Entry
131610791 CDS
T09680
Name
(RefSeq) endoribonuclease Dicer homolog 1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvo03036
]
131610791
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131610791
microRNA pathway
RISC loading complex
131610791
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
dsrm
DND1_DSRM
Helicase_C
DEAD
ResIII
Dicer_dsRBD
SNF2-rel_dom
Dicer_PBD
CARD_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131610791
NCBI-ProteinID:
XP_058738823
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Position
LG6:158390441..158401143
Genome browser
AA seq
1885 aa
AA seq
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MEDAIRVSSPSYWLDACEDIPCDDFIDYHVSSVVSDPNQQHQQQSINNNNQDFFGGIDRI
LDSIKNGAGLPLTVTPPPPLSDDDANLSNAKNQGNNTDGGALVDQDEERFSKRARVNVYD
NERRINHQNNSNGSKERFERCFNGRKRPRAQDFKKRDNSSSVRRDVRGYWERDKSSGSND
LVFRSGTWEPDRVRQDKMIVDIKQETSDDKNIEQVSKEKVVPEEKARQYQLDVLEQAKSR
NTIAFLETGAGKTLIAVLLIKSIHETLNQQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQ
VGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEGIDLLILDECHHA
VKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSTVC
TIKDRKELEKHVPMPSEIVVEYDKAASLCYLHEQIKQMEAEVEEAAKSSSRRSKWQFMGA
RDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCSYKVAQSFLAALQND
ERANYQLDVKFQESYLSKVVSLLKCQLSEGAVSDKNDGVDDSGNSAAHNGSDEPEEIEEG
ELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQNTDDFRAIIFVERVVSAL
VLPKVFAELPSLSFVKCASMIGHNNSQEMRTHQMHDTIAKFRDGRVTLLVATSVAEEGLD
IRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEETLRR
EAIERTDLSHLKDTSRLISVDTHPETIYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSI
LRPEFIMEKHENSGGPTEYSCRLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEM
GAFTDMLLPDKGSGGEKEKAEQNDEGDALPGTARHREFYPEGVANILKGEWILSGKDACK
DSKLLHLYLYTIKCENVGQSKDPFLTQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKA
SLVFRESIDITENQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGNKSLDP
MNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGLAFGQKS
HPTYGIRGAVAQFDVVKASGLVPNRDSVQTQKHINMTSKGKLMMADTCTSADDLVGRIVT
AAHSGKRFYVDSIRYEMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLVYKQQPLIRG
RGVSYCKNLLSPRFEHSEAHEGESEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSI
MRRVESMLLAVQLKNMINYPVQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFL
FLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYILADRFAPSRWAAPGVLPVFDED
TKDDESSLFDQEKSICKIEMMDITDGVEDEMEDGELESDSSSYRVLSSKTLADVVEALIG
VYYVEGGKNAANHLMKWIGIHIEIDPDEMECTTKPSCVPDSILRSVDFDALEGALNLKFK
DKGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFSYTDLPPGRLTDLRAAA
VNNENFARVTVKHNLHLHLRHGSSALEKQIKEFVKEVQEELLKPGFNSFGLGDCKAPKVL
GDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEY
RASRAGNLATVEVFIDGVQVGTAQNPQKKMAQKLAARNALASLKEKEVDKIQEKNDENGT
KNGNQTFTRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFAVRVNTTDKGWTGECVGE
PMPSVKKAKDSAAVLLLELINKLYS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgcaattagggtttcatccccttcttactggttggatgcttgcgaagatatc
ccttgtgacgatttcattgattaccatgtttcttccgtcgtctctgaccccaaccaacaa
caccaacaacaatccattaacaataataatcaagatttttttggcggtattgatcgaatc
ttggacagtatcaagaacggtgctggcctccctcttaccgtcactccgccaccacctctc
agtgatgacgatgctaacctctctaatgcgaagaatcaaggtaacaacactgatggtggt
gctcttgttgatcaagatgaagaacggttcagcaaacgagctcgtgttaatgtatacgac
aatgagagaagaatcaatcatcaaaacaacagtaatggtagcaaggagaggtttgagagg
tgtttcaatggtaggaagaggccgagggctcaagatttcaagaaaagggataattcttct
agtgtcaggagagatgttaggggttattgggagagggataagtcttctggttcaaatgat
ttggtgtttcggtcgggaacttgggagcctgatcgggttcgccaagataaaatgattgtt
gatatcaaacaggaaactagtgatgataagaatatcgagcaggttagtaaggagaaggtt
gttcctgaggaaaaagctagacagtatcaattggatgttcttgagcaggcaaagagtaga
aatactatagcttttcttgaaactggagctgggaaaaccctcattgctgttcttcttatt
aaatctatacacgagactttaaatcagcagaataagaaaatgcttgcagtctttttggtt
cctaaagttccacttgtttaccagcaagcagaggtaatccgtgagcgcacaggatatcaa
gtgggccactattgtggagaaatggggcaggatttctgggatgctcgaaggtggcagcgg
gaatttgacactaagcatgttttggttatgactgctcaaatacttttgaacattttgaga
catagcattataaaaatggaaggaatcgatctcctgattctcgatgaatgccatcatgct
gtaaagaaacacccatattccctggtgatgtccgagttctaccatacaacatccaaagaa
aagaggccatctgtattcggaatgactgcttctcctgttaaccttaagggtgtctccagc
caagtagactgtgcaataaagattcgtaatcttgaaagtaagctagattcaacagtttgt
accattaaagatcgcaaagaactggagaaacatgtgcctatgccctctgaaattgtggtg
gagtatgataaagcggccagtttgtgttatttacatgagcaaataaagcagatggaggct
gaagttgaggaagctgcaaaatctagttcaagaagaagcaaatggcagtttatgggagct
agagatgctggagctaaggaagagctgcgccaagtatatggtgtttctgaaagaacagaa
agtgatggagctgcaaacctaattcagaagttgagagctattaattatgcacttggtgaa
ctgggacagtggtgttcatataaggttgcacaatcttttcttgcagctctgcaaaatgat
gaaagggcaaactaccaacttgatgtcaagtttcaggaatcttatctgagtaaagttgtg
tctcttctgaaatgtcaactgtcagagggtgccgtttctgacaaaaacgatggagtagat
gactcaggtaatagtgcagctcacaatgggtctgatgaacccgaagagattgaagaagga
gagcttccggacagtcacgttgtctctggtggggagcatgtggatgtcataataggtgct
gccgtggccgatggcaaggtgacccctaaggtgcaggctttaatcaaaatactcctcaag
tatcagaacacagacgactttcgtgcaatcatctttgttgagcgtgttgtgtctgcgtta
gttctaccaaaggtttttgccgagcttccatctcttagttttgtgaagtgtgcaagcatg
attggtcacaacaatagtcaggaaatgcggacccaccaaatgcatgatacgattgccaag
ttccgtgatgggcgggtcacattgttagttgccactagtgttgctgaagaaggacttgat
atccgacaatgtaatgttgttattcgctttgatcttgcaaagactgttctggcatacatt
cagtctagggggcgtgctagaaagcctgggtctgattacatcctaatggttgagagggga
aatttgtcacatgaagcattcctaaggaatgccaggaacagtgaggagactttgcggaga
gaagcaatagagagaacagaccttagtcatctgaaagacacttcaaggttgatttctgta
gatacccatccagaaacaatttaccaggtgaaatccactggtgcagtagttagtttaaat
tctgctgtaggacttgtccacttctactgctctcagctacctagtgacagatattcaatt
cttcgtcccgaatttattatggagaagcatgaaaactccggaggccccactgaatattct
tgcaggcttcaactgccatgtaatgcaccatttgaaaatctggagggtcctatctgcagt
tcaatgcgcttggcacaacaggctgtttgtctagctgcttgcaaaaaattgcatgagatg
ggagcatttactgacatgttattgcctgataaaggaagtgggggagaaaaagaaaaggct
gagcaaaatgatgaaggggatgcacttccagggactgctagacatagggagttctatcct
gaaggtgtggccaatatactgaagggagaatggatcttatccggaaaagatgcttgcaag
gactccaaattgcttcatctttatttgtataccataaagtgcgagaatgtaggccagtca
aaggatccgttcttgactcaggtttcagattttgcagtactttttggcactgagctggat
gcagaggtgttatcgatgtccatggatctatttattgctcgaaccgtgactaccaaggca
tctcttgtctttagagagtcaatagatatcactgagaatcagttggcatccctgaaaagc
tttcatgtaagattaatgagcattgtcttggatgtggatgttgaaccatctaccactcct
tgggatcctgcaaaagcatatttgtttgtcccaatggtcggcaataagtctttagatcct
atgaaccaaattgactggcatctggttgagacaataattggagctgatgcatggaaaaat
cccctacagaaggctcgaccagatgtttaccttggcactaatgagagaactttaggtggc
gatagaagggaatacggattcgggaagttgcgtcatggcttggcttttgggcagaagtca
catccaacctatggaatcagaggagctgtggcccagtttgatgtagtgaaagcttcggga
ttggttcctaacagagattccgtgcaaacacaaaagcatatcaacatgactagcaaagga
aaattgatgatggcagatacctgtaccagtgcagatgatctggtagggagaattgtaact
gctgctcattcagggaagaggttttatgttgattcaatacgctatgaaatgtcagcagag
aattctttccctaggaaagaaggttatcttggtcctctggaatacagttcatatgctgat
tactacaagcaaaaatacggtgttgatttggtttacaagcagcaacctcttataagaggg
cgtggtgtatcatactgcaagaatcttttgtcccctcgatttgaacacagtgaagcacac
gaaggtgaatccgaagagactcatgacaaaacttactatgttttccttcctcccgagcta
tgcttggtacatccactgcctggatcactcgttcgtggtgctcagagactgccttcaata
atgaggagggttgaaagcatgctgcttgcagttcagcttaagaatatgataaattatcct
gttcaggcttcaaagatcttggaggccttgaccgctgcctcttgccaggagacattttgc
tatgaaagggctgagcttctgggagatgcttatctgaaatgggttgttagtcgctttctt
ttcctaaaatatccacagaaacatgaaggccagcttactaggatgagacaacaaatggtc
agtaacatggtattatatcagtatgcattaagtaaaggtcttcaatcatatatcctagca
gatcgctttgccccatccagatgggcagctcctggggtgctgcctgtatttgatgaagat
acaaaggatgatgagtcatctttatttgaccaagagaagtccatttgtaagattgagatg
atggatatcactgatggggttgaggatgaaatggaagatggtgagcttgagagtgattca
agttcttaccgagttctgtccagcaagacacttgcagatgttgtggaagcactgattgga
gtgtattatgtcgaaggtggtaagaatgctgctaaccaccttatgaaatggattggtatt
cacatagagatcgatcccgatgagatggaatgtacaacaaagccatcctgtgttccagac
agcatactcaggagtgttgatttcgatgctttagaaggggctctaaatcttaagtttaaa
gacaagggtctgctgatagaagccataactcatgcctcaagaccatcctcaggagtatcc
tgttatcagcggttggagtttgttggtgatgctgtgttggaccatcttataactaggcat
ttatttttctcatacacagacctgcctccaggacgtctgactgaccttcgagctgctgct
gtaaacaatgaaaattttgcacgtgttacagttaagcacaatcttcacctgcatttgcga
catgggtccagtgccttagaaaaacagattaaagaatttgtgaaggaagttcaagaagaa
ttattaaaaccagggtttaactcgtttggtcttggagactgcaaagctcccaaggtcctt
ggtgacattcttgaatctattgcaggggcaatttttcttgacagtgggaggaatactgct
gtcgtttggaaggtttttcagcctcttttgcatcctatggtcacaccagagactttgcca
atgcatcctgtgcgtgagctgcaagagcgatgccagcagcaggccgaaggtttggagtat
agagctagtcgcgctgggaatttggccactgttgaagtattcattgatggagtgcaagta
gggactgctcaaaatccacagaaaaaaatggcacagaaattagctgctagaaatgccctt
gcttctttgaaagagaaggaagtggacaaaattcaggagaaaaatgatgaaaacgggaca
aagaatgggaaccagacatttactagacaaacattaaatgacatctgtttgcgaagaaac
tggcctatgccattctaccggtgtgtgagcgagggtggtcctgcacatgccaagaggttt
acatttgcagtgcgcgtgaatactactgataaaggttggacaggtgagtgtgttggagag
ccaatgccaagtgtcaagaaggccaaagactcagctgctgttcttctcttagaactaata
aacaaattatactcgtga
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