Vicia villosa (hairy vetch): 131610860
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Entry
131610860 CDS
T09680
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131610860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvo04121
]
131610860
Ubiquitin system [BR:
vvo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131610860
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_NXF1-5
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
131610860
NCBI-ProteinID:
XP_058738898
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Position
LG6:complement(160464197..160467995)
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AA seq
589 aa
AA seq
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MQKMTNRFPEEVLEYVFSFIQCDKDRNAISLVCKSWYEIERWCRRQIFVGNCYAVSPSTV
TKRFPELRSISLKGKPHFADFNLVPEGWGGYVSPWIAAMACGLPLLEEIRLKRMVITDES
LELIAKSFKNFKVLVLISCEGFTTDGLAAIASNCRNLKELNLQESELEDLSGHWLSQFPD
SYTSLVSLNISCLNNEVNLSALERLLGRCPNLQTLRLNHAAPLDKLPNLLSRCPQLAELG
TGVYSAEMRPDVFSNLVTAFAGCKQLKNLSGFWQVLPSYLPALNPVCTRLTSLNLSYAVI
QSSDLIKLVGQCPNLLRFWVLDYIEDAGLDAVAASCKDLQELRVFPSDPFGLEPNIALTE
QGLVSVSKGCPKLQSILYFCRQMSNAALNTIAQNRPNLTRFRLCILEPRTPDYLTLQPLD
SGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHYMLSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCPVSYGACKLLGQQMPRLNVEVIDER
GSPDSRPDSCPVEKLYIYRSTAGPRLDMPDFVWTMEDDSSVRLEQPSSV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatgacgaaccgtttccctgaggaagttctcgagtacgtgttctccttcatt
caatgtgacaaagaccgaaacgctatctctttagtgtgtaaatcatggtacgagatcgaa
cggtggtgcaggaggcagattttcgtcgggaactgctatgccgtgagtccttcaacggtg
acgaaacggtttccggagctgagatccatttcgttgaaagggaaaccgcactttgcggac
ttcaatttggtgccggaaggatggggaggttacgttagtccgtggatcgcggctatggcg
tgtggtttgccgttgctggaagagattcggctcaagaggatggttataacagatgagagc
ttggagcttattgctaagtcgtttaagaattttaaggttttggtgcttatttcgtgtgag
gggtttacgacggatggacttgctgccattgcttctaattgcaggaatttgaaggaattg
aacttgcaggagagtgaactggaggaccttagtgggcattggttaagccaatttcctgat
tcttacacatcattagtgtcacttaacatctcttgcttgaacaatgaggtgaatttgtcc
gcactagagcgtctgcttggtaggtgtcctaacctccagactcttcgtctcaatcatgct
gcgccccttgataaactgccgaacttacttagccgatgtcctcagctggctgagttaggc
acaggagtttactcagctgagatgcgtccagatgtcttttcaaacctagtaaccgcattt
gctgggtgtaagcaattgaagaacttgtctggtttttggcaagttctgccatcctacctt
ccggcactaaatcctgtctgcactaggctaacatcactaaacctgagttatgctgtcatt
caaagctctgatcttatcaagcttgtcggtcaatgccccaatttgttgcggttttgggtg
cttgattacatagaagatgctggtcttgatgccgttgctgcttcatgcaaggatctacaa
gagttgagggtgtttccttctgatccatttggcttagagccaaatattgcgttgacagaa
cagggtcttgtctctgtatctaaaggctgcccaaagctccagtccattctatatttttgt
cgtcaaatgtctaatgctgctctaaatactattgcgcagaataggcctaatttgactcgc
tttcgcctgtgtattctggagcctcgaactcctgactatcttacccttcaaccactggat
tctggttttggagctattgtagaacattgtaaggatcttcggcgtctttccctttctggc
cttcttactgatcgtgtttttgagtatattggaactcacgcgaagaagctggagatgcta
tctgttgcctttgctggagatagcgatttgggtctccattatatgctgtctgggtgcgat
aatcttaggaagctagagatcagggactgcccctttggtgacaaggctctcttggccaat
gcggcaaaactcgagacaatgcgatccctttggatgtcctcttgcccagtgagttatgga
gcatgtaagctactgggacagcaaatgcccagacttaatgttgaagtcattgatgaaaga
ggatctccagattcaaggccagatagttgtcctgtggagaagctttatatatacaggagt
actgccgggccaaggttggacatgcctgattttgtctggacaatggaggatgattcctcc
gtacgactcgagcaacctagcagtgtatag
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