Vicia villosa (hairy vetch): 131612724
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Entry
131612724 CDS
T09680
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131612724
03036 Chromosome and associated proteins [BR:
vvo03036
]
131612724
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131612724
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
131612724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
HHH_9
HTH_44
Tex_central_region
SPT6_acidic
Tex_N
Tex_YqgF
BRCA2
Motif
Other DBs
NCBI-GeneID:
131612724
NCBI-ProteinID:
XP_058740461
LinkDB
All DBs
Position
LG6:148744818..148750467
Genome browser
AA seq
1307 aa
AA seq
DB search
MDEDRVKIDEMEEDESSELKKMKKTRKYLLDEDDYDLLRENNNESFKKFKRLKKNAQHNQ
GDFGDDLDETDFVDEIDDFVVDSFTPVRTLCEPQVSSSALREARELFGDVDELLLARDHV
RGTNDFRETRLEDDFEPIVLSDKYMTQNDHRIRDLDIPERMQISEESTGAPSLDESSIDE
EGRWIVTQLKHGEVPWIYKKDSREELPVDKDDIVRFLKLHHVQNLDIPFIAMYRKEECLS
LLKDLDQHEAGDDDNWDKNNKTPTLKWHKILWALQDLHRKWLLLQKRKSALHLYYNKRFE
QESRCVCGETRRNLNRKLFESVMRSLKEAESETEVDDVDFKFNLHFPPGEVGVDEGQYKR
PKRKSMYSTFSKAGMWEVANRFGCSSEQLGLCMSVVMLPEWEDPKETPEEVASNFTCAMY
DTPEEVLKCARHMTAVEISCEPSIKKHVRWCFSDHAVVSTSPTADGNITMDSFHQFSAVK
WLREKPLFKFEDVQWLLIQKAEEAKLIQVTIKLPDEYLNKLIDQFNEYYVSDSVSISAQL
WNKQRKLILQDAIFRFLLPSMEKEARGVLATKAKHWVLMEYGKALWNKVSVGPYQQNEND
LSPDDEAAPRVMACSWDLGKPQTTFVMLDSSGEVQDVLYTESLTLTSQVVNDQQRKKNDE
KRLSKFITDHQPHVVVLGAANWPCTRLREVIYEVIFKMIEENPRDVVPDMLNIVYGDESL
PRLYENSQISSEQLPSQQLGIVRRAVALGRFLQNPLAMVAASCGPRKEILSWKLSPLERF
LNPDDKIEMIEQVMVDVTNQTGLDINLAISHEWLFAPLQFISGLGPRKAATLQRSLVRAS
SIYSRKDFFTEHQLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYILAQEL
AKDVYDEDGKDDANDDDALEMAIEHVRDRPSCLKNLDVEEYAAGKFRQDKIKIFYDIKRE
LIQGFQDWRKQYEEPSKDEEFYMISGETEETLAEGKMVQVTVRRVQAQKAICGLESGITG
ILMKEDFADDWRDITELSDRLHEGDTLTCKIKSIQNSRYQVSLVCKESEMRSDRLQNNHE
VDPYYHEDRSSLPSEQDKTQKEKESAEKYFKPRMIVHPRFRNITDEEAIEFLSNKEPGES
IFHPHSRCPSYLNLTLKIHDGVYAHKKIVEGRKKLEDIKNSLQTGKTFKIGDDIFEDLDE
VMDRYVDPLVTHLKTMLNHRKFRTGMTTEVDKLLRFEKAENPMRIAYGFGVSLKHPGTFL
LTYIRSSNPHHEYIGLYPQGFMFRKKMFKDIDRLVAYFQRHIDDPQK
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatagagtgaagatcgatgaaatggaagaagatgaatcatcagaactgaag
aagatgaagaaaacgagaaagtatcttctcgatgaagatgattatgatctgttgcgtgag
aataataacgaaagcttcaaaaaattcaaacgtcttaaaaagaatgctcaacacaatcaa
ggagacttcggggatgatttggacgaaaccgactttgtagatgagattgacgattttgtt
gtggattcttttactcccgttcgcactttgtgcgaaccacaagtgtcttcatcagcttta
cgagaagctcgagagttatttggtgatgtcgatgagttgcttttggctcgcgatcatgtt
cgaggaacaaatgattttagagagactagacttgaagatgattttgagcctattgttctc
tctgacaaatatatgactcagaacgatcaccgcattagggacctcgacattccggagaga
atgcagatatccgaggagagtaccggtgctccttcacttgatgaaagtagtatagatgaa
gagggtcggtggatagttactcaactaaaacatggggaagtcccttggatttataagaaa
gattcaagggaggagctaccagttgacaaggatgatattgttagatttttgaaactgcat
catgtgcaaaatttagatattccttttattgccatgtatcggaaagaggagtgtttaagc
ttattgaaagatcttgatcaacatgaagctggtgatgatgataattgggataagaataac
aagacacctactctaaaatggcacaagatactttgggctctacaggacctgcacaggaag
tggttgcttcttcagaagcggaagagtgccctccatttatactacaataaacggtttgag
caagagtcgcgttgtgtatgtggggaaacaagacgaaacttgaataggaaattgtttgaa
tcagtaatgagatcattgaaggaggcagaatcagagacagaggttgatgatgttgacttc
aagttcaatttgcatttcccaccaggtgaagtgggtgttgatgagggacagtacaaaagg
ccaaaacggaagtcaatgtatagcactttcagcaaggcgggtatgtgggaggttgcaaac
aggtttgggtgtagttctgagcaacttggattatgtatgtcagtagttatgctgcctgag
tgggaagatccaaaggaaacaccagaagaggtggcttctaacttcacatgtgctatgtac
gatacacctgaagaagtacttaaatgtgctaggcacatgacggctgttgagataagttgt
gagcctagcattaagaaacatgttcgttggtgcttttctgaccatgctgttgtgtcaacc
tcccctactgctgatggaaatataaccatggattccttccatcagttttctgcggtgaag
tggctgcgagaaaagcctttgtttaaatttgaagatgtccagtggctccttatacagaag
gcagaagaagccaaactcattcaagttactattaagcttcccgatgagtatcttaacaag
ttaatagaccaattcaacgagtattatgttagtgatagtgttagcatatctgctcaactg
tggaataaacagaggaagctgatactgcaggatgcaatttttcgatttctgttaccatca
atggaaaaagaagcaagaggtgtcttagcaaccaaagcaaagcattgggtactgatggag
tatgggaaggccttgtggaataaggtttctgtggggccttatcaacagaatgaaaatgat
cttagcccggatgatgaggctgctcctagggtcatggcctgctcttgggaccttggaaag
ccacaaacaacttttgtcatgttagattcgtcgggagaagtgcaagatgtgctatacacc
gagtcacttactttaacgtcacaggttgtcaatgaccagcaaaggaaaaagaatgacgag
aaacgactgtcgaagtttataacagatcaccaaccacatgttgttgttttaggagcagct
aattggccttgcactcgtttgagagaagttatatatgaggttatttttaagatgatcgag
gaaaatcctagagatgttgtgcctgacatgctcaacattgtgtatggtgatgaatctctg
cctcgtctttatgaaaattctcaaatttcttctgaacaacttccttcacagcagctaggt
atagtgaggcgggctgttgctcttggtagatttctccagaacccattggcaatggttgca
gcatcatgtgggcccagaaaggaaatattgtcatggaagctgagccctttggagagattt
ctcaacccagatgataaaattgaaatgattgagcaggttatggtagatgtgaccaatcag
actggcttagacattaatttagcaataagtcatgaatggttatttgctccattacaattt
atttcggggcttggtccacggaaggctgcaaccttgcagagatcgctggtaagagccagc
tcaatttattcccggaaggacttttttacagaacaccaacttggtaaaaaagtgtttgtc
aatgcagttggtttcttgcgtgtccggcggagtggattggctgctagtagtagccaattt
attgatttgctggatgatacacgaattcatccagaatcctatattcttgcacaggagttg
gccaaagatgtgtatgatgaggatggcaaagatgatgcaaatgatgatgatgccctagag
atggccatagaacatgttagagatcgacctagttgtttgaaaaacctggatgttgaggaa
tatgctgctggaaaatttcgtcaagacaaaattaaaattttctatgatattaaaagagaa
ttgattcaagggtttcaggattggcgtaagcaatatgaagaaccaagtaaggatgaggag
ttttatatgatttcaggtgagactgaagagactcttgctgaaggtaaaatggtccaggtt
accgttcgccgagttcaagcccagaaagcaatatgtgggcttgaatctggaattactgga
atccttatgaaagaagactttgcagatgactggagagatataactgaattatctgatagg
ctacatgaaggtgacactctcacttgtaaaatcaagtcaatccaaaatagcaggtatcaa
gtctcccttgtctgtaaagaaagtgaaatgagaagtgatcggttacagaacaatcatgaa
gttgatccctattaccatgaagaccggagctccttgccgagtgagcaagacaaaactcag
aaagaaaaggagagtgcggaaaagtatttcaagccaaggatgattgttcatccacgattt
cggaacatcacggacgaagaagcaattgagtttttgtcaaacaaggaacccggtgaaagt
atttttcatcctcattcccgatgtccttcctacctaaatttgactcttaaaattcatgat
ggagtatatgcccataagaaaatagtcgaaggcagaaagaaactcgaggatatcaaaaac
tcacttcaaaccggaaagacatttaaaattggagacgacatttttgaggatttagatgag
gttatggaccgatatgttgatcctttggttactcacttaaagacaatgttaaatcatcgc
aagttcaggacaggtatgacaacagaagttgacaaacttttgaggtttgaaaaggcggag
aatcccatgcgcatagcttatggttttggcgtctctcttaaacatcctggcacattttta
ttgacttacatcagaagtagtaatccacatcatgagtacattggtctttacccccaagga
ttcatgttccgcaaaaagatgttcaaggatattgacaggcttgtggcatattttcaaaga
cacatcgacgatccacaaaaatga
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