Vicia villosa (hairy vetch): 131613126
Help
Entry
131613126 CDS
T09680
Name
(RefSeq) polyadenylate-binding protein 7-like
KO
K13126
polyadenylate-binding protein
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131613126
09123 Folding, sorting and degradation
03018 RNA degradation
131613126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131613126
03041 Spliceosome [BR:
vvo03041
]
131613126
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131613126
mRNA cycle factors
Stress granule specific factors
131613126
Spliceosome [BR:
vvo03041
]
Complex C
Other components
Complex C specific factors
131613126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_3
Nup35_RRM_2
RRM_occluded
DddA-like
Motif
Other DBs
NCBI-GeneID:
131613126
NCBI-ProteinID:
XP_058740811
LinkDB
All DBs
Position
LG6:complement(166227791..166232662)
Genome browser
AA seq
635 aa
AA seq
DB search
MAVSPSVATTPASLYVGDLHPDVSDAQLREAFSDFSSLASVRICRDSSTGKSLCYGYVNF
LSLQDANRAIEVKNHSILSGKAIRVMWSRRDPDARKSSIGNVFVKNLAESIGNSGLEEMF
KKYGNILSSKVVMSEDGKSKGYGFVQFETEESANTAIEKLNGSTVDNKQIYVGKFVKKSD
RVMSGPDARYTNLYMKNLDLDITETLLQEKFSSFGKIISLAVAKNSNGMSKGFGFVNFDK
PDDAKRAMEAMNGLQLGSKILYVSRAQKKAEREQILNQQFEEKRKEQVLKYKGSNIYVKN
IDDTVSDEGLRDHFCACGTITSAKVMRDDRGISKGFGFVCFSTPEEANKAVNTFHGFMFH
GKPLYVALAQKKEVRQAQLQLQYAQQIAGLAGPSTAIVPGGYPPFYYTATGVVPHAPPRA
GLMYQPMSLRPGLRANGSAPPARSFQQSPAPVVSNNTRQHRQNRGRMNGHAVSQGKTHSG
TFMPQTQQTSQSVISSRDSSTQQKTRQAKYVPSGRPHEMEKGSGFSSGGSNSGRGLQVSE
MLHLMVANATPEQQKEILGEHLYMLVQKIKPNLAAKITGMLLEMDSDKLMALMESPESLS
AKVEEAFQLLKNSKAKVSGQDVLHSNFLTSEVAVN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctccgtccgtcgccaccactccagcttctctttacgtcggcgatcttcat
cccgatgtctccgacgctcagcttcgtgaagcgttctccgatttcagttctctcgcttcc
gttcgcatttgcagagactcttccaccggaaaatcactctgttatggctacgtcaacttc
ctctctcttcaagacgcaaatcgtgcgattgaggtgaagaatcattctatcttgagtgga
aaagcgataagagtcatgtggtcacgtcgtgatcctgatgcaaggaaaagtagcataggg
aacgtgtttgttaagaatttagctgaatcaataggtaattctggactagaagagatgttt
aaaaagtatgggaatattttgtcgagcaaagttgtcatgtctgaggatgggaagagcaaa
ggatatggctttgttcaatttgaaacggaggaatctgcaaatactgctattgagaagttg
aatggctctactgttgataataagcaaatatatgttgggaagtttgtcaagaaaagtgac
cgcgtaatgtctggccctgatgctagatatacaaacctgtacatgaagaatttggacttg
gatattacagaaacacttttgcaggagaagttttcctcttttgggaaaatcattagcttg
gctgttgcaaaaaacagcaatgggatgtcaaagggttttggctttgtgaacttcgataaa
ccagatgatgctaaaagggcaatggaagcaatgaatggactgcaacttggttcaaagatt
ctgtatgtatccagggcacagaagaaggctgagcgtgagcagatcttgaatcagcaattc
gaagagaaacgaaaggagcaagtcttgaaatataagggctcaaacatttatgtgaagaat
atcgatgacactgtaagtgatgaaggactgcgggatcatttttgtgcatgcggcactata
acttctgcaaaagttatgcgagatgacagagggataagcaaaggatttggttttgtgtgt
ttttccactcctgaggaagcgaataaagctgtgaacacttttcatggattcatgttccat
ggtaaaccactatacgtggctcttgctcagaagaaagaggtcagacaagctcaattgcag
cttcagtacgcacagcaaattgcaggactagctgggccatcaactgcaattgtccctggg
ggatatcctcctttctactacacagctactggtgttgttccacatgctcctcctcgggcc
gggctaatgtatcagcctatgtcattgaggccagggttgagggctaatggctctgcacct
cctgctaggtcattccaacagtcacctgcacctgttgtttctaacaatactaggcagcat
aggcaaaataggggcaggatgaatggccatgcagtatctcagggaaagactcactctggt
acatttatgccacaaacccagcagacttctcagtctgtgatatcttcaagagactcaagt
actcagcagaaaaccagacaggcgaagtatgtacctagtggacgcccccatgagatggaa
aaaggatctggattctcatctggtggttcaaactctggtagaggcttacaagtatcagaa
atgctgcatctcatggttgctaatgctactccagagcagcagaaagagatacttggtgag
catctatacatgcttgtccagaaaatcaagcctaacttggcagcaaagattactggcatg
ctattggagatggatagtgataaactgatggctctaatggaatcaccagagtctctttct
gctaaggtggaagaagctttccagctgctgaagaactctaaagctaaagtttctggacag
gatgtacttcattcgaatttccttacatctgaggttgcagtgaactga
DBGET
integrated database retrieval system
