Vicia villosa (hairy vetch): 131613693
Help
Entry
131613693 CDS
T09680
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131613693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131613693
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131613693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131613693
NCBI-ProteinID:
XP_058741323
LinkDB
All DBs
Position
LG6:56248415..56253759
Genome browser
AA seq
1474 aa
AA seq
DB search
MVGVSSRTRSKNVPLFGSIPFHGSCACSLKSNRRKSDIGLSSKKRKPNEEPFVLHEGVDV
IPIDSDKEGDEEPSVLKFSEACAEQVENFGNGDADEVGDEAWLEYLNKNKFEVGDIDVKN
EEQSGDIVGEGGLEDCEINSFEGCVNAADDNGEGKEAKKKGWKEEEKNMRWKKNGPPEGV
SSRTRSKNVLLFGSLSFHGSGSLESKKRKPNEESFVLHEDDDVIRIGSDEEGDEEGLKFS
DKKFSQSCVDNGDVEGFEDCERNNFEGCVDGDADADEVGDEDWLRYCNKNKFEGDIDVEN
EEQSGDSVDNGGEGGLENCERNRFEGCIGVENEVEREKNGGLGDLVEKDEIFDDEKCGLI
SENMIIGSDHESDDDKDDGDDQDEGGLKNCENNSFEGCVGVENEAVSEKNGGIGELAEKD
ESFDDEECGLISENLITDSEDESEYEDESDDDDDDDEDDEDEYDESEEIETSDEEFQVDE
VNEVSDSDNSSSSYADDDDDNGEEKEAKKKGWRKKEEEEEVVVVEEEVEKDVGLGMVWQE
CDNELAEMVGQNNEISERNNALNKKVSYVPMEAPSSSSKLHQASKGMQMKEKNVSDDDDD
DDNVYVGKTKSKSKSKAKESVIIGDFDEEEMQSVQALGVNDESDSSIQTKQKEMKSSEKQ
KMTEMKGSNYKGRASSNSGEKKESVELCLNQRGKSTVFMPKELRLRQLLAEYYWGNKNSR
IQNDSPILEMKDVIWRDTRSPPVCNETAPLIWSLKKVEKVQKTKTEEEEEVLWDIMDTSL
RELDAESMIGNLGTNEVAQEKIGSSSPDCDHDIRLDEEIGVYCRRCGWVVTDIKDVSPQV
VDKYPYEGSGQRASFGDANVSHFQDSHFNVSDNDSGTNFSFDERTVWDLIPDVKQTLYSH
QQEGFEFIWNKLVGNIELQALKNANLQREGGCIISHAPGTGKTKLTIMFLKAYLKVFPKC
LPVIVAPAGLLLTWEDEFKKWDIGVPFHNLNNPELSVKEHDDVVNATNWSNTRRHSTEET
RMAKLILWFKETSILGISYTLFKDLAHGEEECKDKKKNNQKRKENSYMRKALLEAPGLLV
LDEGHTPRNARSRVWKVLSKIQTKKRIMLSGTPFQNNFLELYNTFSIVKPSFPNTIPPKL
KKFCLKHKEAARKWSWEPVTGNSTTGNPSDDKIKHLKLLMDPFVHVYKGAILQKKLFGLR
DCVLRLKPDSFQKQILESIKISQNILNFEHKLALASVHPSLFLESKLLEEEESVVDKERL
EKVRLDPHVGVKAKFLVEFVNLCNAVNEKVLVFSQFIPPLRLIVEQLNSIFNWAEGKEIL
YMDGMIDLKEKQSLIHNFNDANSKAKILLACTKACSEGISLIGASRVVLLDVVWNPSVER
QAISRAYRIGQKRTVYTYHLLTHETSECVKYFKQAEKDRLSELVFSDNDKGKNRAVNLED
GILDLMLQHKKLKDMFVECVVQPKERDLVESYYY
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgtttctagtcgaactcgtagtaagaatgttccactcttcggtagtattcca
tttcatggctcgtgtgcgtgttcgttgaaatctaaccgtagaaaaagtgatataggtttg
agctctaaaaaaagaaagccaaatgaagagccttttgtgttgcatgaaggtgttgatgtt
attcccattgacagtgacaaggaaggagatgaagagccttctgtgttgaaattttctgag
gcatgtgctgaacaagtggaaaattttggtaatggtgatgctgacgaggttggagatgag
gcttggttggaatatcttaacaagaacaagtttgaggttggcgatattgatgttaaaaat
gaggaacaaagtggagatattgttggtgaaggagggttggaagattgtgaaataaacagt
tttgagggttgtgttaatgctgctgatgataatggtgaggggaaagaagcgaagaaaaag
ggttggaaggaggaggagaagaatatgcgttggaagaagaatggtccgccggagggtgtt
tcgagtcgtactcggagcaagaatgttctgctgtttggtagtctttcatttcatggctca
ggttcgttggaatctaagaaaaggaagccaaatgaagagtcttttgtgttgcatgaagat
gatgatgttattcgcattggtagtgacgaggaaggagatgaagaggggttgaaattttct
gataagaaattttctcaaagttgtgttgataatggtgatgtggaagggtttgaagattgt
gaaagaaacaactttgagggttgtgttgatggtgatgctgatgctgacgaggttggagat
gaggattggttgagatattgtaataagaacaaatttgagggtgacattgatgttgaaaat
gaggaacaaagtggcgatagtgttgataatggtggtgaaggagggttagaaaattgtgaa
agaaacaggtttgagggttgtattggtgttgagaatgaagtagagagagagaaaaatgga
ggacttggtgatttagttgaaaaagatgaaatctttgatgatgagaagtgtggtttgata
tctgaaaacatgattataggttcagatcatgaatctgatgatgataaagatgacggtgat
gatcaagatgaaggagggttgaaaaattgtgaaaataatagttttgaaggttgtgttggt
gttgaaaatgaagcagtgagcgagaaaaatggaggaattggtgagttagctgaaaaagat
gaaagctttgatgatgaagagtgtggtttgatatctgaaaacctgattacagattcagag
gatgaatctgagtatgaagatgaatctgatgatgacgatgatgatgatgaagatgatgaa
gatgaatatgatgaaagtgaggaaattgaaactagtgatgaagaatttcaagttgatgag
gtgaatgaagtttctgacagtgataatagcagttcttcttatgctgatgatgatgatgat
aatggtgaggagaaagaagcgaagaaaaagggttggaggaagaaagaggaggaggaggag
gtggtggttgtggaggaagaggtggagaaagatgtgggtttgggaatggtttggcaagaa
tgtgacaatgagctggcggagatggtgggtcaaaataatgaaatttctgagagaaataat
gccttaaacaaaaaggtttcttatgttccaatggaggctccttcttcttcttctaaattg
catcaagcatctaaaggtatgcaaatgaaagagaaaaatgtgtctgatgatgatgatgat
gatgataatgtttatgttggcaaaaccaaatccaagtccaaatccaaagccaaagaaagt
gttattattggtgattttgatgaagaagaaatgcaatctgttcaagctttaggtgttaat
gatgaaagtgattcttctattcaaacaaaacagaaggagatgaagagttcagagaaacag
aaaatgacggagatgaagggaagcaattataaaggtagagctagcagcaatagtggcgag
aagaaggaatccgtagagttgtgtttgaatcaaaggggaaaaagcacagtttttatgccg
aaggagttacgtttacgccaactccttgctgaatactattggggaaacaagaatagtaga
attcagaatgattcacctatattggagatgaaagatgttatttggcgtgatacaagatca
ccacctgtttgtaatgagacagctccattgatatggagccttaaaaaggtggagaaagtg
caaaagaccaagaccgaggaggaggaggaagtactatgggatataatggatacaagcctt
agagaacttgatgctgaatccatgatcggaaatttggggaccaatgaagttgctcaggaa
aaaattggaagttcatcccctgactgtgatcatgacattcgtctcgacgaagagattggt
gtatattgcaggcggtgtggttgggttgtcactgatattaaagatgtctcaccacaagtg
gttgataaatatccctacgaaggttcgggacaaagggcttcgtttggtgatgcaaatgtc
tcacactttcaggactcacacttcaatgtttctgataatgactcggggactaatttctct
ttcgatgaaagaacagtttgggacctaattcctgatgtaaaacagaccttatattctcac
caacaagaaggttttgagttcatttggaataagttagtaggaaacatcgagcttcaagcg
ttaaagaatgccaatcttcaaagggagggcggttgcattatttcacatgctcctggaact
ggaaagacaaagctgacaatcatgtttctcaaggcgtatttaaaagtttttccgaaatgc
ttgccggtcattgttgctcctgctggattgttgcttacttgggaagacgaattcaaaaaa
tgggacataggtgttccatttcacaatttgaacaatcctgagttatctgttaaagagcat
gacgatgttgttaatgcaactaattggtctaatacacggcggcatagtacggaagagaca
cgaatggctaaactgattttgtggttcaaagaaacgagcattctgggaatcagttacact
ttgttcaaggatctagcccacggagaagaggaatgcaaagataagaaaaagaataatcag
aagagaaaagaaaacagttatatgagaaaggctttgcttgaagctcctggtttgttggtt
ctagatgaaggacatacgccaagaaatgcaagaagtcgtgtttggaaggtgttgtcaaaa
attcaaacaaagaagcgaattatgctttctggaactcctttccagaataatttcttggaa
ctgtacaacactttcagcatagtgaagccttcttttcctaacacgataccgcccaagctg
aaaaagttttgcctgaaacataaggaagcagcaagaaaatggagttgggaaccggttact
ggaaacagtacaacaggaaatccttccgatgataagatcaagcatttgaagttgctaatg
gatccctttgtccatgtttacaaaggcgcgattcttcaaaagaagcttttcggattaaga
gattgtgtgcttcgtttgaagccggacagttttcagaaacaaattcttgagagcattaaa
atttctcagaacatattgaactttgagcataagctggcactggcatcggtccatccgtct
ctattcctcgaaagcaaactattggaagaagaagaatctgttgtcgacaaggaacggctt
gaaaaagttagattggatccacatgtcggcgtcaaagcaaaatttttggtggagtttgtt
aatctttgtaatgctgttaatgaaaaagttctcgtgttcagccaattcatccccccttta
cgcttaattgttgagcaattaaactcaatcttcaattgggccgaggggaaagaaatactc
tacatggatggcatgattgatctgaaggaaaagcagtctttaattcacaacttcaatgat
gcaaacagcaaagctaagattctacttgcatgtacgaaagcttgttccgagggaattagc
ttaattggagcgtcgagggttgtgctacttgatgttgtatggaatccttctgtcgagcga
caggcaatcagtagagcatataggattggacaaaagagaactgtgtacacgtaccatctg
ctcacgcacgagacttccgagtgcgttaaatatttcaaacaggccgaaaaggaccggttg
tctgaactagtattttcagataatgacaagggcaaaaaccgtgcggtaaaccttgaagat
ggtattctggatctaatgcttcagcacaaaaaacttaaagacatgtttgtcgagtgtgtg
gtacagccgaaggaaagagatttggtggagagttattattattga
DBGET
integrated database retrieval system
