KEGG   Vicia villosa (hairy vetch): 131614980
Entry
131614980         CDS       T09680                                 
Name
(RefSeq) sm-like protein LSM4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03018  RNA degradation
vvo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131614980
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131614980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvo03019]
    131614980
   03041 Spliceosome [BR:vvo03041]
    131614980
Messenger RNA biogenesis [BR:vvo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131614980
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131614980
Spliceosome [BR:vvo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    131614980
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 131614980
NCBI-ProteinID: XP_058742487
LinkDB
Position
LG1:115606892..115609154
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREDGAPGRQVKGVGRGFEE
GGARGAGGGRGRGGPGGRPGGNRGAGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgctcccactttcccttctcaagaccgctcaaggccaccccatgttggttgaactcaaa
aatggggagacttataacggccatttggttaattgtgatacatggatgaacatccatctc
cgagaagtcatttgtacctctaaagatggagatagattttggcgtatgcctgaatgctat
attcgggggaataccattaagtaccttcgagttcctgatgaggttattgacaaagtccag
gaagaaactaagagtcgcactgatcgaaagccacctggtgtgggacgtggaaggggaaga
ggtagggaggatggtgctcctggacgtcaagtaaaaggagttggacgaggctttgaagaa
ggtggtgctaggggggctggaggaggccgaggaaggggtggcccaggtggaaggcctggt
ggaaacagaggtgcagggcgaggtagaggttga

DBGET integrated database retrieval system