KEGG   Vicia villosa (hairy vetch): 131616223
Entry
131616223         CDS       T09680                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03020  RNA polymerase
vvo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131616223
  09124 Replication and repair
   03420 Nucleotide excision repair
    131616223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvo03021]
    131616223
   03400 DNA repair and recombination proteins [BR:vvo03400]
    131616223
Transcription machinery [BR:vvo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131616223
DNA repair and recombination proteins [BR:vvo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131616223
SSDB
Motif
Pfam: RNA_pol_Rpb4 L_PA-C-like PDDEXK_18
Other DBs
NCBI-GeneID: 131616223
NCBI-ProteinID: XP_058743479
LinkDB
Position
LG7:101730507..101733217
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAVNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggcgaagaggaggaaaacgccgccgagctcaaaatcggagacgagtttttgaaa
gcaaagtgtttgatgaactgtgaagtttcattaattctggagcacaaatatgagcagctt
cagcagtcatctgatgatgccgtcaatcaagtttctcaggtattcgaaaagtcattgcag
tatgtaaagcgtttcagccgctataaaaatcctgatgctgttagacaagttcgagaaatt
ctggcaagatatcagttggccgagtttgagctgtgtgtcctaggcaatctttgcccagaa
actgtggaggaagctattgctatggttccatctattaagacaagaggacgggctcaggat
gacgaagcaattgagaagatgttaaatgacttatcactgattaagaaatttgaataa

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