Vicia villosa (hairy vetch): 131616289
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Entry
131616289 CDS
T09680
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131616289
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvo01009
]
131616289
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131616289
03036 Chromosome and associated proteins [BR:
vvo03036
]
131616289
Protein phosphatases and associated proteins [BR:
vvo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131616289
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131616289
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131616289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
131616289
NCBI-ProteinID:
XP_058743558
LinkDB
All DBs
Position
LG7:103284028..103289731
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AA seq
516 aa
AA seq
DB search
MNGGDEGVVAPEEPLQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDSKDQHGSRKDLESTDYSNSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGSVFLLSTNDKTIKFWKVQEKKVKKISDMNIDPSKANGNGSIASSSNSCILK
PHLANGGSSDKTYSYLSSDFSFPPGGLPSLRLPSVVASHETSLLARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCHT
LAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAREGRYIL
SRDYMSLKLWDINMDSGPVSTFRVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGS
YSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSIGNSITRVVRRGAENTGVDA
NGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgagggtgttgtagctccggaggaacctttgcaaccgttggagtgg
aaattctcgcaggtttttggcgagcgtgcggctggagaggaagttcaggaagtggacata
atttctgctattgaattcgacaagtctggtgatcatcttgctaccggtgatcgcggtggt
cgagtagttctctttgagcggacagattcaaaagatcagcatggatcaagaaaggatttg
gaaagtaccgactattctaatagtcggcatcctgagttccgctataaaaccgagtttcag
agtcacgagcctgagtttgactatcttaagagcttggaaatagaagagaaaattaacaaa
atcaaatggtgccaaacagctaatggttctgtattcctcctatctacaaatgacaaaaca
attaaattttggaaggttcaagaaaagaaggtgaagaaaatttctgacatgaatattgac
ccttcaaaagcaaatggaaatggatctatcgcaagttcgagcaattcttgtatccttaag
ccacatcttgcaaatggaggatcttcagataaaacatatagttatctaagcagtgatttc
tcatttccacccggaggtttaccgtcactaagattaccctcggtagtagctagccatgag
accagtctgttggctcgatgtcgtagagtatacgcacatgctcatgactatcacatcaat
tctatttcaaataacagcgatggagaaactttcatatccgccgatgatttgagaataaat
ctttggaacctggaaattagcaatcaaagttttaatattgtcgatgtaaagcctgcaaat
atggaggatcttactgaggttataacatcagctgaatttcacccgacacattgtcataca
ttggcatatagcagttcgaagggctcaattcgtcttgttgacttgcggcagtcagcctta
tgtgattcccatgccaaattatttgaagaacaggaggcccctggatccagatcatttttc
acagagattattgcttccatctcggatataaaattcgcaagggagggaagatacatactt
agtcgtgattacatgtctctgaagttatgggacattaatatggattctggcccggtttca
acattccgggttcacgagtatttaaggccaaagctatgtgatttatacgaaaacgattca
atttttgataagtttgagtgttgtctgagtggcgacggatcccgagtttcaaccggttct
tacagcaatctattccgagtgtttggttgcgccccgggaagtacagaggcgacaactttg
gaagccagcaaaaatccaatgaggcgacaagttccaacaccatctaggccttccagatca
atcggaaacagcatcacaagagtcgtacgacgcggagctgaaaacaccggtgtcgatgca
aacggaaactcgttcgacttcacaacaaagttgctacacttagcatggcacccgagtgaa
aattcaatcgcctgtgctgctgcaaatagcttatacatgtactatgcatga
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