Vicia villosa (hairy vetch): 131616418
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Entry
131616418 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131616418 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131616418
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131616418
5.6.2.5 RNA 5'-3' helicase
131616418
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131616418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
UvrD_C_2
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
131616418
NCBI-ProteinID:
XP_058743730
LinkDB
All DBs
Position
LG7:complement(106113332..106121344)
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AA seq
1461 aa
AA seq
DB search
MGSGGRTIFSFDLNEPPTEDSDERDGVFCFQPQKTQSSTNSHTSNLFLASTAAQGTDLSV
ASTAAAQGTDLSVASTAAQGTDLSVASTAAQGTDLSVASTAAKGTDLSVASTAAKGTDLS
VASTAAKGTDLSVASTVAKGIMNNHAFSHASTVSGFQPFIRSKSASVSGGDAGLMIAGYQ
GAKAPSKSIKEEGVNVMESQKSGSANAQSTEREEGEWSEEEGYANANGGNNLPRKSQAPE
EQATSGMVNGSVVASDSKSNNIKNSNSNSINDAKCSQASIGLESNSSEQKINGVLNSASN
IKSEASIDPQEEPSIVPKQKEVKGIEASHALRSANIPGKRRIDQRKEEMLGKKRSRQTMF
LNLEDVKQAGPIKTSTPRRQTFSSPVISRTVKEVRTVPAQVERVGIAKDQNQSDSSFGEG
VSQIETHEPKSDCNSDNSGSFGRHRRINSETEPPMEVNLPPIPRQGSWKQQTESRQQKNA
FGSNRKLGQSGQSSNDVRPVNKKHHSIKKQTPASYQSQDSSVERLIREVTSEKFWHHPGE
TDLKCVPGKFDSVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRE
RGWYDVKVLPVHDFKWSFKEGDVAILSSPRPGSAVRPKQNNSSSAHDGGESEITGRVVGT
VRRHIPIDTRDPPGAILHYYVGDSYDPSRGDDDHIVRKLQTGSIWYLTVLGSLATTQREY
IALHAFRRLNMQMQTAILKPSPEHFPKYEQQTPAMPECFTPNFVEYLRRTFNEPQLAAIQ
WAAMHTAAGTSSVATKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKH
VAPESYKHANELNSENAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELL
SRVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKTREEVSGWMQQLR
NREAQYTQQLHCLHRDLNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQNLASVVEGRDK
VLVEMSRLAVLEGRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGF
DMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQ
AGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLPEEPYYKDPLLRPYIFYDVR
QGRESHRGGSASYLNTVEAQYCLRLYEHVQKAVKSFGLGKISVGIITPYKLQLKCLQREF
EEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAGHGVGFVADIRRMNVALTRARRALW
VMGNANALTHSEDWKALIADAKSRNCYMDTESLPKDFLVPKGAVYTPLPGKAPLNMRGMR
SGGPRYNRSMEMHMESRVGAPFEDDERMNGASVSSRNGNHRPPRYLQENSLDDLSDKSRD
AWQHGIQKRQGSTGTMAKRDV
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgggttccggaggaagaacgatatttagttttgaccttaatgagcctcctacagaagat
agtgatgagagggatggtgttttctgcttccagcctcaaaagacccagtcgtcaacaaat
tcccatacttctaacttatttttagcttctactgctgcccaaggaactgacttatctgta
gcttctactgctgctgcccaaggaactgacttatctgtagcttctactgctgcccaagga
actgacttatctgtagcttctactgctgcccaaggaaccgacttatctgtagcttctact
gctgccaaaggaaccgacttatctgtagcttctactgctgccaaaggaaccgacttatct
gtagcttctactgctgccaaaggaactgacttatctgtagcttctactgttgccaaagga
ataatgaataatcatgcattttcacatgcctcaactgtttcgggattccaaccatttatt
cgctctaagtctgcaagtgtgtctggtggggatgctgggctgatgatagcaggatatcag
ggtgcaaaggctccctctaagtccataaaagaggagggcgtgaatgttatggaatctcag
aaatctggttcggcaaatgctcaatctacagaaagggaagaaggggaatggtctgaggag
gagggttatgctaatgcaaatggaggtaataatctgccacgaaaaagtcaggctccagaa
gagcaagcaacatctggaatggtgaatggaagtgttgtggcttctgacagtaagtctaac
aatatcaagaattctaattctaatagtataaatgatgcaaagtgtagccaggcttctata
ggtctagaatcaaatagcagtgaacaaaaaatcaacggtgtcctaaattcagctagcaat
ataaaaagtgaagcttctattgatccacaggaggagcccagtatagttcccaagcaaaaa
gaagtgaaaggtattgaagcaagtcatgcacttaggtccgcaaatattcccgggaagaga
aggattgaccaacgcaaagaggaaatgttgggaaagaaacgtagtaggcagaccatgttt
cttaacttggaagatgtcaagcaagctggtcccatcaaaacctcaacacctagaagacag
actttctcatcaccagttataagccgtactgtgaaggaagttcgtactgttcctgcacaa
gttgaacgggttggaatagctaaggatcagaatcaatcagactcttcttttggtgaaggt
gtaagtcaaattgaaacacatgaacctaaatctgattgtaatagtgataattctggatca
tttggtaggcataggagaatcaacagtgagactgaacctcctatggaagtgaatttacca
cccataccaagacagggatcatggaaacaacagacagagtcgaggcaacagaagaatgcg
tttggttctaataggaagttgggacagagtggtcaaagctccaatgatgtcaggccggta
aacaagaaacatcactctatcaagaagcagacccctgccagttaccagtcccaggactca
tctgttgaacgcctcattcgagaggttaccagtgaaaagttttggcatcacccaggagag
accgatttgaagtgtgttcctgggaagtttgactcagtggaagagtatgttcgagtattt
gagcctttgctttttgaggaatgccgtgctcaactttacagtacttgggaagaatcaaca
gaaacagtttcaagggatactcatattatggtgcgagtaaaggcaaatgagtcaagagaa
agaggttggtatgacgtgaaagtacttccagtacacgatttcaaatggtcatttaaggag
ggtgatgttgcaattctttcgtcccccaggcctggatcagcagtcagacccaagcagaac
aattcatcttcagctcacgatggcggggaatcagaaatcactggacgtgtggtgggtaca
gttagacggcacatacctattgatacccgtgaccctcctggtgcaatactccattactat
gtaggggattcttatgatcctagcaggggtgatgatgatcatatcgtaaggaaacttcaa
actggaagcatctggtatctcacagtgcttggttctcttgctaccacacagagggaatat
attgcgctacatgcatttcgtcgcttaaatatgcagatgcaaactgcaattctaaagcct
agtcctgagcactttcctaaatatgagcagcagaccccggcaatgcctgaatgcttcacg
ccaaacttcgttgagtacctgcgcaggaccttcaatgaaccccagttggcagcaatccaa
tgggcagctatgcatacagctgccggtacaagtagtgtggcaacaaagaggcaagatcct
tggccttttactcttgttcaaggacctccaggaacaggaaagacacatacagtatgggga
atgttgaatgtcattcaccttgtgcagtatcaacactactacacctcattgcttaagcat
gtagctcctgaaagctacaagcacgctaatgagctcaattcagagaatgcccccacagga
tctattgatgaagttcttcaaaatatggatcaaaatctgttaagaactttgcctaaacta
gtcccaaagcctagaatgttagtttgtgctccttctaatgctgccactgatgagcttctt
tcccgtgttcttgatcgtggatttattgatggagagatgaaagtatatcgacctgatgtt
gctcgggttggggttgattctcagacacgtgctgcccaagcagtttctgttgagcggaga
actgaacaacttctggtcaagactcgtgaagaagtttctggatggatgcaacagttaaga
aatcgcgaagctcagtatactcagcagttgcattgtcttcatagagatctgaatgctact
gctgctgctgtacgctcccaaggatctgttggtgttgaccctgaccttctcatggcccgt
gatcagaatcgtgatgttttgctgcagaaccttgcatctgtagttgaaggcagggataag
gttctggttgagatgtctcgccttgctgttttggaaggtaggtttcgacctggtagtggt
ttcaatttggaagaggcccgtgctagtttagaggccagttttgccaatgaagctgaaata
gttttcactacagtatctagcagtggccgcaagttgttttctcgactttcccatggattt
gatatggtagtcattgatgaggcagcccaagccagtgaggtgggagttcttcctcctctt
tctcttggggcagcacggtgtgttcttgttggagatcctcagcagctccctgctacagtt
atcagcaaggctgctggaacactgatgtacagcagaagtctttttgaaaggttccaacaa
gcaggatgccctacaatgttgctgtctgtgcaatatagaatgcatccccaaatccgggat
ttcccttctagatacttttatcaggggcgccttagtgacagtgagagtgtgattaaattg
cctgaggaaccatactataaagaccctttacttagaccttatatattctatgatgtcaga
caaggacgggagtctcacagaggtggatcagcctcctacctcaacacagttgaagcacaa
tattgtctccgactgtacgagcatgttcagaaagcagtgaagtcttttggtctggggaag
atttctgttggcataattactccttacaagctgcagttgaaatgcctccaacgcgagttt
gaggaagtcttaaattcagaagaagggaaggatctatatatcaacactgtagatgctttc
caaggtcaagagcgtgatgtgattattatgtcttgtgtgcgtgctggtcatggggttggt
tttgttgctgatatacgtcggatgaatgttgcccttacgcgcgcaagaagggccctttgg
gtgatgggaaatgccaatgcactgacacattccgaggattggaaagcgttgattgctgat
gcaaaatcccgaaattgctacatggacacggaatctcttcccaaggactttttggtgccc
aagggagctgtttacacaccattacctggtaaggcacccttgaatatgaggggtatgaga
tcaggtgggccaagatataatagatcaatggagatgcatatggaatccagagtgggagca
ccatttgaagatgacgagaggatgaatggcgcttcagtaagctccagaaatgggaaccac
cgtccaccacggtatttacaagagaattccttagatgatttgagtgataaatccagagat
gcctggcagcatggcatacagaagaggcagggttcaactggaaccatggcaaagagagat
gtatag
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integrated database retrieval system
