Vicia villosa (hairy vetch): 131616445
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Entry
131616445 CDS
T09680
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131616445
03041 Spliceosome [BR:
vvo03041
]
131616445
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131616445
Spliceosome [BR:
vvo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131616445
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
131616445
NCBI-ProteinID:
XP_058743753
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All DBs
Position
LG7:107281696..107286395
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AA seq
425 aa
AA seq
DB search
MQNHRLKQQHQQQQQQQAMMQQALLQQHSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRS
VYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRH
LFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQK
TGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGIEEKQTPENKTVVE
LTNGSSEDGKETPINNDAPENNPQYTTVYVGNLGSEATQLDLHRHFYTLGAGVIEEVRVQ
RDKGFGFVRFSTHAEAALAIQMGNAQSYLCGKLIKCSWGSKPTPPGTASNPLPPPAAAPL
PGLSATDILTYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQ
MMYYQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcataggttgaagcaacagcatcagcaacaacaacagcaacaagctatgatg
caacaagcgcttcttcaacaacactccctataccaccctggtctcctagctccacctcag
attgaaccaatcccaagtggaaatctgcctcctggttttgatccaagtacttgccgcagt
gtgtatgtgggcaacgttcatacccaggtaaccgagccacttctgcaagaagtttttgca
ggtactggcccagttgaagggtgtaaacttttcagaaaagagaagtcctcctatggattc
attcattactttgatcgcagatctgctgctctggccatattaactctcaatggaagacat
ctttttgggcaacctatcaaagttaactgggcatatgctagtggtcagagagaggataca
tcaggccattacaacatatttgttggtgacctcagtcccgaggttactgatgctacactt
tttgcatgcttttctgtctaccaaagttgttcagatgcaagggttatgtgggatcagaag
actgggcgttcaaggggatttggatttgtttcattccgtagtcagcaggatgctcaaagt
gctataaatgatttgaccggtaagtggcttggaagtagacaaatacgctgcaattgggca
acaaaaggtgctggcggcattgaagagaagcaaaccccagaaaacaaaactgtggtggaa
ctaacaaatggctcatctgaggatggtaaagagacacctatcaacaatgatgctcctgag
aacaatcctcagtatacaactgtttatgtgggtaaccttggttctgaggcaacacagctt
gatctccatcgtcatttctatacccttggggctggtgtgatagaggaggttcgtgtccag
cgtgataaaggatttgggtttgtgaggtttagtactcacgctgaagcagctctggcaatt
cagatgggaaatgcccagtcttatctctgcggaaaactaattaagtgctcttgggggagc
aagcccactccacccggaaccgcttcaaatcctcttcctccacctgctgcagcgcctttg
ccaggtctgtctgcaactgatattctgacctacgagaggcagatagcaatgagcaagatg
ggtggtgttcacgctgcattgatgcatccccaagcgcagcatcctcttaagcaggccgca
attggagcaagccaggcgatatatgacggcgggttccaaaatgttgctgctgcacagcaa
atgatgtactaccagtaa
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