Vicia villosa (hairy vetch): 131616623
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Entry
131616623 CDS
T09680
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131616623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131616623
03036 Chromosome and associated proteins [BR:
vvo03036
]
131616623
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131616623
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131616623
Chromatin remodeling factors
BAF complex
131616623
PBAF complex
131616623
GBAF(ncBAF) complex
131616623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
HDA2-3
AAA_14
AT_hook
Motif
Other DBs
NCBI-GeneID:
131616623
NCBI-ProteinID:
XP_058743971
LinkDB
All DBs
Position
LG7:complement(114004458..114015025)
Genome browser
AA seq
2209 aa
AA seq
DB search
MHSGGGGPGRPAGRPSTSAAASPSSSSSASQLGFESLQQQQHHQQQQQQQQQQQHQQQQQ
LGSRQTFQQQLLRKPEGNEAFLAYQAGRQGVFGSSNFQQPNAMQLPQQPRKFTDLAQQHG
TNQDAQLRGQDSEQQQMVNPVHQAYLQYAFQAAQQKPTMGIHSQQHAKMGMLNPASVKDQ
EMRMGNLKMQDIMAMQAMNQAQGSSSRNSSEHNVRGEKQMEQGQQIRPIQAPEAQHGIQN
VMNSQIAVAAQLQAMQAWARENNIDLSHPTNAHLMAKLIPLMQSRMALPPKTSESNIGAQ
SSSVPVSKQQVNSPAVASESSAHANSSSDMSGQSGSSKARQTVPPSHLGSMANAGTAGQS
SDMAMQQFNVHGKESQAPQRQQVKAGNGMPSYHSQQSSATMNLGADHPLNAKGSSSGTEP
PQMQYPRQLNQSTTQAGGPTKEGGLGNSAKSQGAPAQMHERQNGFTKQQLHVLKAQILAF
RRLKKGEGTLPQELLQAITPPPLELQAKHPNHPAGGQNQVKSAGNIVPEQPRHVEANESQ
SNPAVNGPSSVKQESFSRDEKSAPPPVHIQAVVPSVSKESASTSSAGKEEQKPIGSSIKP
KQDNEHGNNSTPVRNELALDRGKAIAPQASVSDTTQITKPAQANTVSQPKDVGPTRKYHG
PLFDFPFFTRKHDSFGSSMMVNNSNNLSLAYDVKDLLFEEGIEVLGKKRTENLKKIEGLL
AVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCE
RQRVELVRQVQATQKAAREKQLKSIFLWRKKLLEAHWAIRDARTARNRGVAKYHERMLRE
FSKHKDDDRNRRMEALKNNDVDRYREMLLEQQTSIPGDAAERYEVLSSFLSQTEEYLHKL
GSKITVAKNQQEVEEAAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDS
SSVNKYYNLAHAVNEMVVRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGK
TVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYKWLPSVSCIFYAGGKDYRTKLF
HQVSALKFNVLVTTYEFIMYDRAKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRR
LLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGPTQNAEDDWLETEKK
VITIHRLHQILEPFMLRRRVEDVEGSLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLDP
EDEERKLQRNPNYQVKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWIL
DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAINDFNGP
DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYME
AVVDKIPSHQKEDEMRGGGTADLEDELVGKDRYIGSIEGLIRNNIQQYKIDMADEVINAG
RFDQRTTHEERRLTLETLLHDDERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDDELD
WIDDMTRYDHVPKWIRANTKEVNTAVAALSKRPLKKSLLGGSVAVDTSELGSERKRGRPK
KHTSYKELEDEDLEYSEASFEERNGSANEEGETGDLEDDGYSGADGAQPIDKDQMEDGLC
DGGYEFSQSLEIARNNQVVQEAGSSGSSSDGKKVTQIVSPSISSQKFGSLSALDARPGSI
SKRMTDELEEGEIAMSVDSHMEHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRHA
SEKPEERSGSEMIPRLSVQADRKYQAQLRTDLESKSHVDSNASRNDQNTSLKNKRTLPSR
RVANTSKLHGSPKPTRLNTISAPSEDGGEHSRESWEGKPINSSGSSAHGSRMTEIIQRRC
KNVISKLQRRIDKEGHQIVPLLTDLWKRIENSGFSGGSGNNLLDLRKIDQRIDKLEYTGA
TDLVFDVQFMLKSAMHYYGFSLEVRTEARKVHDLFFDILKIAFPDTDFRDARSALSFAGP
VSASTTVSSPRQAAVGQGKRHKLMNEVEPDPHPSQRPLQRGSASSGENSRIRVRMPPKES
KTGNVSSSSIREQPRLQDDSPPLLTHPGELVVCKKRRNDREKSTVKTRTGPVSPPMRSPG
AGSVPKDRLTQQTQGWVGQPSQQPNGSVGWANPVKRLRTDSGKRRPSHM
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgcattccggtggtggtggtcctggccggccggcgggtcggccatctacttcggcagct
gcttcgccttcctcttcatcttcagcatcacagttaggatttgaatctttgcagcagcag
caacaccatcaacagcaacaacagcaacagcagcagcaacaacaccagcaacagcagcag
ctaggttctagacagacatttcaacagcagctgcttagaaagcctgaaggaaatgaagca
ttcttagcttatcaagcagggcgtcaaggtgtatttgggagtagcaatttccaacaaccc
aatgctatgcaactgccccagcagcctagaaaatttaccgatttagctcagcaacatggt
accaatcaagatgctcagctcagaggtcaagatagcgagcagcagcaaatggtaaatcct
gtccaccaagcataccttcaatatgctttccaggctgcgcaacaaaagcctactatggga
attcattcgcaacagcatgctaagatgggaatgttaaaccctgcatctgtaaaagatcag
gaaatgcgcatgggaaatctgaaaatgcaggacattatggcaatgcaggcaatgaatcaa
gctcaaggatcgtcttctaggaattcatctgaacacaatgtccgtggagaaaagcagatg
gagcaaggacaacagataagacccattcaagcaccagaagcacagcacggcatccaaaat
gttatgaacagccagattgcagtagctgctcaattgcaagccatgcaggcatgggcacgt
gagaataatattgatttatcacatcctacaaatgcacatttaatggcaaagctcattcca
ctgatgcagtcaaggatggccctaccaccaaaaaccagtgagagcaacattggcgcacag
tcgtcatcggtccctgtttcaaagcagcaggttaattctccagcagttgcaagtgagagc
tcggcgcatgctaattcatcaagtgacatgtctgggcagtcaggttcatcgaaagccaga
cagacagttcctcccagccatctcggctcaatggcaaatgctggtacagctggtcagtcc
agcgacatggccatgcagcaattcaacgttcatggtaaagagtctcaagctcctcagagg
caacaagtaaaagctggaaatggaatgccctcttatcattctcagcaatcctctgcaacc
atgaacctaggtgcagaccatcctttgaatgcaaaaggttcatcttctggtacagaacct
cctcaaatgcagtacccgaggcagttaaaccaatctacgacacaggctggaggcccaaca
aaagaagggggtttgggaaattctgctaaatctcaaggggctccagctcagatgcatgag
cgacaaaatggatttacaaaacaacagctacatgttcttaaagcacagatactagcattt
aggcggttaaagaaaggagaaggtaccctgcctcaagaacttcttcaagctatcactcca
ccacctcttgagttgcaggcaaaacacccaaaccatcctgcaggaggacaaaatcaagtc
aaatctgctggaaatattgtgccagaacaaccacggcatgttgaggccaatgaatcacaa
tctaatcctgctgttaatggacccagttctgtaaagcaggaatccttttcaagagacgag
aaatctgctccgccaccagttcatattcaagctgttgtgccgtctgtatcaaaggaatct
gcttcaacatcatctgctggaaaggaagagcagaaaccaattggatcctctattaagcca
aagcaggacaatgaacatggaaataacagtactcctgttagaaatgagttggcattagat
agggggaaggcaattgcaccacaagcctctgtatctgacacaacgcaaattacaaaaccg
gcacaggcaaacactgtttctcagccaaaggatgtgggaccaaccagaaaatatcatgga
cccctgtttgattttccgttcttcactaggaaacatgactcttttgggtcatctatgatg
gtaaacaacagcaataatttatcactggcatatgatgtcaaagatcttctttttgaggaa
ggcatagaagtacttggcaagaagcgaacagaaaatttaaagaagattgaaggcttattg
gctgtaaacttagagaggaaacgaattaggcctgaccttgtgttgagactgcaaattgaa
gagaaaaagctccgtcttttagatcttcaggcacgtttgagggatgagattgatcaacag
caacaagagataatggcaatgccagataggccatatcgtaagtttgttaggttgtgtgaa
cgccagagggtggaacttgttagacaagtacaggcaactcaaaaagctgctagggagaag
caactcaaatctatatttctatggcgtaagaaacttcttgaggcacactgggcaattcgt
gatgcccgtactgcccgtaacaggggggtggccaaatatcatgagaggatgttgcgggaa
ttctcaaaacataaagatgacgatagaaatagaaggatggaagccctaaaaaacaatgat
gttgacagatatagggagatgttgctggaacagcagactagcattccgggtgatgctgca
gagagatatgaagttctttcatctttcttatcccagactgaggagtatctacataaacta
ggaagtaagataacagttgccaaaaaccaacaagaagtagaagaggcagcaaaagcagct
gctgctgctgcaaggttgcagggtctttctgaagaagaagtcagagctgctgctgcttgt
gcaggagaggaagtgatgattaggaatcgttttctcgagatgaatgctcctagagacagt
tcatctgtcaacaagtattacaacctcgcacatgcggtgaatgaaatggtcgtaagacaa
ccatccctgttacgagctggaacattgagagactatcagcttgttggattgcaatggatg
ctttctttgtacaacaacaaattaaatggaattttagctgatgagatgggtctcggtaaa
actgtacaggttatggcattgattgcatacttgatggaattcaaaggaaactatggtcca
catcttataatagtcccaaatgcagttatggttaactggaagagtgaattatataagtgg
ttaccatctgtgtcatgcattttttatgctggagggaaagattatcgaacaaaattattt
catcaagtttctgctctgaagtttaatgtcttggtgactacttacgagttcatcatgtat
gaccgggcaaaactttcaaaaattgattggaagtatattgtgattgatgaagcacaaaga
atgaaggatagagattcagttttagcacgtgaccttgataggtatcgttgtcaaagacgt
ctgcttttgacaggaacaccgttgcagaatgatttgaaggaactctggtcacttttaaat
ttacttctccctgaggtttttgataataagaaagcctttcatgattggttctcaaaacca
tttcaaaaagaaggtcctactcaaaatgcagaggacgattggctcgagacagagaagaaa
gtcatcacaatccatcgacttcatcagattcttgagcctttcatgctcaggcgccgtgtt
gaagatgttgaaggctcactaccaccaaaggactccatagttttacgatgtaaaatgtca
tctgtccagagtgctatttacgactgggtcaaatcaactggtactcttcgtcttgatccc
gaggatgaggaacgtaagcttcagagaaatcctaactaccaggtgaaacaatataaaact
ttaaacaacagatgcatggagctgcggaaaacatgcaatcatccattgcttaattatcca
ttcttcagtgatttatctaaagagttcattgtaaaatcttgtggaaaattgtggatccta
gataggatcctcataaaacttcaaagaaccggacatcgagttctacttttcagtaccatg
acaaaacttcttgacatcttggaagaatacctgcagtggcgaagactcgtgtacagaaga
attgatgggacaactagtttggaagaccgtgaatcagctataaatgacttcaatggccct
gattcagactgtttcattttcttgcttagcattcgagctgctgggagaggccttaacctt
cagtctgctgacacagttgttatttatgaccctgatccaaatcctaaaaatgaggagcag
gctgttgccagagctcatcgtattgggcagaaaagaccagtcaaggttatctacatggaa
gcagttgtcgataaaatccctagtcatcagaaggaagatgaaatgagaggtggaggcact
gctgatttggaggatgaacttgtaggcaaggatcgctacataggatctattgagggcctc
ataagaaacaatattcagcaatataagatagatatggctgatgaggtaattaatgctggg
cgtttcgatcaaagaacaacacatgaagaaaggcgtttgactttggagacattattacac
gatgacgagaggtatcaagaaactgtccatgatgtgccgtcattgcaggaggtaaatcgc
atgattgctaggagcgaggaggaagtggaactgtttgatcaaatggacgatgaactggat
tggattgatgatatgacacggtatgatcatgtgcctaaatggattcgtgccaatacaaaa
gaagttaatactgctgttgctgctttatcaaaaagaccattgaagaaaagtttattaggt
ggcagtgttgccgtggatacaagtgaacttggttcagaaagaaaaagaggacgacccaaa
aaacatactagttataaagaactggaagatgaagatttggaatactctgaagcaagcttt
gaagaaagaaatgggtctgcaaatgaagaaggggaaacaggagatttggaagatgatggg
tatagtggagccgatggagctcagcccattgataaagatcagatggaagatggtctatgt
gatggtggatatgaattttctcaatctttagaaattgccagaaataatcaggtggttcaa
gaagctggttcctctggatcttcctctgacggtaaaaaagtgacacagatagtatcacca
tcaatttcctctcagaaatttggctccctgtcagcattagatgcccggccaggttccatt
tcaaaaaggatgacagatgagttagaggaaggggaaattgcaatgtctgttgattctcac
atggagcatcaacagtctggaagttggattcatgatcgtgatgaaggtgaggatgaacaa
gttttgcagaagccaaagattaaacgcaaacgtagtcttcgcgttcgaccccgtcacgcc
tctgaaaaacctgaagaaagatctggtagtgaaatgatacctcgtttgtcagtccaagca
gaccgtaaatatcaagcacagctgaggactgacctagaatcaaaatcacacgtagattca
aatgccagcaggaatgatcaaaacacttcattaaaaaataagcgaactttaccttcaagg
agggttgctaatacatccaaattacatggttcaccaaaacctactcgtttgaataccata
tctgctccttcagaggatggtggcgaacattccagggaaagctgggaggggaagcctatc
aattcaagtggatcctctgctcatggctctaggatgacagaaatcattcagagaaggtgc
aaaaatgtaattagcaagcttcaaaggagaatagacaaggaaggccatcaaattgtacct
ctgttaacagatttgtggaagaggattgagaattctgggttcagtggtgggtctgggaat
aacttgttggatctacggaagattgatcagcggattgataaattggagtatactggagcc
acggatcttgtatttgatgtgcaattcatgttaaagagcgcaatgcattattatggtttt
tcccttgaggtaagaactgaagcaaggaaggttcatgatctcttttttgatatattgaaa
attgcatttcctgataccgacttccgagacgcaagaagtgcactctcttttgctggtcca
gtttctgcctcaaccaccgtatcatctccgaggcaagcagctgttgggcaaggcaagagg
cacaagctgatgaacgaggtggaacctgatccccacccttcacaaagaccactgcaacgc
ggatcagcttctagtggagaaaacagtaggattagagtccgtatgccaccaaaggaatca
aaaaccggaaatgttagcagcagcagtatacgagagcaaccccggctgcaggatgattct
ccaccactactgactcatccaggtgaactagtcgtgtgcaagaaaagaagaaacgacagg
gagaaatcaacggtgaagactaggactggtcctgtttcgccgcctatgagaagtcctggg
gcaggttcagtccccaaagatagattaactcaacagactcaaggatgggttggccaacca
tctcaacaaccaaatgggtcagttggatgggctaatcctgtaaagaggctaagaacagat
tctgggaagagaagaccaagtcatatgtaa
DBGET
integrated database retrieval system