Vicia villosa (hairy vetch): 131616722
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Entry
131616722 CDS
T09680
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131616722
09123 Folding, sorting and degradation
03018 RNA degradation
131616722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131616722
03041 Spliceosome [BR:
vvo03041
]
131616722
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131616722
mRNA degradation factors
5'-3' decay
Lsm complex
131616722
Spliceosome [BR:
vvo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131616722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
KNOX2
Motif
Other DBs
NCBI-GeneID:
131616722
NCBI-ProteinID:
XP_058744126
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Position
LG7:complement(118912198..118915877)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIEADGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaggaaggaaacagttctggacttggccaaatttgttgataaaggagttcaa
gtcaagcttactggtggtagacaagtgacaggtactctgaaaggatacgaccagttactt
aaccttgtcctcgatgaagctgttgagtttctcagagatgctgatgatcctctgaaaact
acagaccagacaagaagtcttggcttaattgtttgcagaggaactgctgtgatgcttgtg
tccccaactgatggtacagatgagattgcaaacccctttattgaggcagatggggcctag
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