Vicia villosa (hairy vetch): 131616798
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Entry
131616798 CDS
T09680
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131616798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131616798
03012 Translation factors [BR:
vvo03012
]
131616798
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131616798
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131616798
Translation factors [BR:
vvo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131616798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
nSTAND3
ATPase
AAA_19
T2SSE
AAA_16
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
131616798
NCBI-ProteinID:
XP_058744229
LinkDB
All DBs
Position
LG7:complement(128071937..128086980)
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AA seq
1154 aa
AA seq
DB search
MHNPKSAASFLIARAKSLHLRRYNYRSLTPSSRSLLFNFQPSLSSFLSNSKPFISTRFFS
GYYNLEQFSDDEYECEFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYE
QIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEY
LDRIQLNSEKRSDCLDSVNSTNQVKDIDMNENANSFVEESVMEKVLQKRSLRMRNMQRSW
QESPEGKKMLEFRKSLPSFKEKEGLLQAIARNQVIVISGETGCGKTTQLPQYILESEIES
GRGAFCSIICTQPRRISAMAVAERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGI
LLRRLLSDRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELF
SNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKLSSFNQVDDYGQDKLWKTQKQLAPRK
RKNQITALVEDALSKSSFENYSPKTRDSLSSWTPDCIGFNLIEAVLCHICRKERPGAVLV
FMTGWEDISCLRDQLKAHPLLGDPNRVLLQTCHGSMATSEQKLIFDKAPPNVRKIVLATN
MAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGESY
HLYPKCVYEAFSDYQLPELLRTPLNSLCLQIKSLQVESIGEFLSSALQAPKPRAVQNAID
FLTMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFL
LPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAI
HSLRKQFSFILKEAGLVDTDASINNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKT
MDDGQVLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGI
QAGHLKMLDGYVDFFLDPNLADCYLKLKEELDKLIQKKLEDPNIDIHKEGKYLMLAVQEL
VSGDQCEGRFVFGRDSRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKT
NEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNAQHEDDKSPPDVTDNML
KLLGKRRKSNRRFD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcataatccaaaatctgccgcgtctttcctcatagcacgtgccaagtctcttcatctt
cgccgctacaactatcgctctctcactccatcttcacggtcactcttattcaactttcaa
ccctcgctttcttctttcttatcgaattctaaaccgtttatctccacacgcttcttctct
ggatattacaatctcgaacagttctctgatgatgaatatgaatgtgaatttgagaaccac
caggcatcgtctacggtggccaatgtggatgagtggaaatggaaacttagtatgctgtta
cggaacgaaaaggatcaggagattgtgtctagagataaaagagataggagagactatgaa
caaatcgctaaccttgccaaaagaatgggactttacagtgagctgtttggaaaagtagtt
gttgcaagcaaagtgcctcttcctaactacagaccagatttggatgacaaacgtccacaa
agagaggtcgtgattccactaagcttgcaaaggagggtggagggtctagtgcaggagtac
cttgataggatacaattaaattctgaaaagagatcggactgtttggatagtgttaattcc
accaatcaggttaaagatatagacatgaatgaaaatgccaattcttttgtggaggagtct
gttatggaaaaggttctccagaagaggagtttgaggatgcgtaatatgcaaagatcttgg
caggaatctcctgaaggcaagaagatgctggaattccggaagtctctcccatcatttaag
gagaaggaaggtttacttcaagctatagcacgtaatcaggtaatagttatatctggagag
actggctgtggtaaaacaactcaacttcctcaatatatattagagtcagagatagaatct
ggccgtggggcattttgcagcattatttgcacacagcctcgaaggatatctgctatggca
gtggctgagagagtgtcagcagagagaggagagtctctgggtgaaacagttggattcaaa
gttcggttagaaggaatgagagggaaaaacacccatctgctattttgcaccagtggtata
ttactccgaaggttgctgagtgatcgaaacctgagtggtataacccatgtgtttgtggat
gaaattcacgagcgaggcatgaatgaagacttcttactgattgtgttgaaggatcttctt
ccacgacgccgtgatttaagattggtattgatgagtgccactttgaatgctgaacttttt
tcaaattattttggaggtgcaccgacatttcatatcccgggtttcacctatcctgtaaga
gctcactttttagaagatgttttggaaatgactggatataaattgtcttctttcaaccaa
gttgatgattatggtcaagataaattgtggaaaacacagaagcagcttgcaccacggaag
aggaaaaaccagatcactgctcttgttgaggatgctctttctaaatcaagcttcgagaac
tatagtcccaagacacgtgattcattatcttcttggacaccggattgcataggattcaat
ctcattgaggctgttctatgccatatatgtcggaaggaacgaccaggtgctgttttagta
tttatgactgggtgggaggatataagctgtttaagagatcagcttaaagcacatcctctc
ttaggtgatcccaatagggttctccttcaaacatgccatggttcaatggcaacttctgaa
cagaaactcatttttgacaaagcacctccaaatgtaaggaaaatagtacttgctacaaac
atggcagaggcaagtattacgatcaatgatatagtttttgtcgtcgactgtggaaaagca
aaagagactacttatgatgctttgaataacacaccatgtctactaccgtcttggatttca
caagcatctgcacggcagagaagaggtagggctggtcgtgttcagccaggagaatcctac
cacctttaccccaaatgtgtttatgaagccttttctgattatcaacttcctgaacttttg
agaacacccttgaactctctttgcttgcaaataaaaagtttgcaggttgagagcattgga
gaatttctatcatcagctttgcaggcaccaaagccacgtgccgttcaaaatgctattgat
tttctcacgatgattggagcattagatgaaaaagaaaatcttaccaatcttgggaagttt
ctctccatacttcctgtagatcccaagctgggaaaaatgctaataatgggagctatattt
cggtgctttgatcctgttcttacgatagttgccggccttagtgtcagagatcctttcctc
ttgccccaagacaaaagagatttagcaggaactgcaaagtctaggttttctgctaaagat
tacagcgatcatatggctcttgttcgagcatatgaaggatggaaagatgctgaaagagaa
ggatcagcttatgaatactgctggagaaattttctctctgcccaaactcttcaggcaatt
cattctcttcggaagcaattcagcttcattttgaaagaagctggcttggtagatacagat
gcaagcattaataacaaattgagtcataatcaatctcttgtacgtgctgtcatatgttct
ggactctttcctggaatagcatcagtggtgcacagggagacatccatgtcatttaagaca
atggacgatggccaggttttattatatgcaaactcggtgaatgcacggtaccagactatt
ccttacccatggttggtttttggtgagaaagtaaaagtcaatgctgttttcatccgcgat
tccactggtgtatctgattcaatacttattctattcggcggtgctctaagtaatgggata
caggccgggcatctgaaaatgttagatgggtatgttgacttctttttggatcctaattta
gctgactgctatttgaagcttaaggaagaactcgataagcttatccaaaagaagctagaa
gatcctaacattgacattcataaggaagggaagtacttgatgcttgctgttcaggaattg
gtctcaggggaccagtgtgaaggaagatttgtatttggccgtgacagccggaagcctaag
gcctctaacgacgagaataaattcacaaaagatggaacaaaccccaagagcttgctccaa
acacttttgatgcgagcagggcattctccgccgaaatacaaaacaaaacatctgaagaca
aatgagttcagagcattggtggagtttaaaggaatgcaatttgttggcaaaccgaaaaga
aacaagcagcttgcagaaagggatgctgctatagaggcattggcttggttaactcacacc
tcagacaatgctcagcatgaagacgataaatctcctcctgatgttactgacaacatgtta
aaactcctagggaagcgtagaaaatcaaatcgacgttttgattga
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integrated database retrieval system
