Vicia villosa (hairy vetch): 131621038
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Entry
131621038 CDS
T09680
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131621038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131621038
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131621038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
131621038
NCBI-ProteinID:
XP_058748225
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All DBs
Position
LG7:complement(84805329..84811429)
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AA seq
1303 aa
AA seq
DB search
MNRKRQLNQLRNPFNSHPFEAVSSGSWHPVESIKVKSGTITIHFADNHHITMDKCTSSDI
RISSRKAIVSDCSRFLRPGIDICVLTPPQQANDSAGLNLEPVWMDARISSIQRKRHDSEC
SCQFFVNFYVDQGSLGLEMRTLCKDIKVFGLNQISILQKVDHNPCENQPYRWSSSEDCSS
LPHSKLLLGKFLADLSWLVVTSVIMKVSFSARSVENKMVYQILVGDSTTSSLSNIESHID
VVSFKNDNGMLVPIVSQVAIANTKRVCQAYESHADEASSSSNADGLRRSKRRHVQPERYL
GCEVKELDVGSFRNSPPVRINTSNKEDDMSLSLACFLRLHHNRQEKDAEKSQKSDRPNTS
QKLLVYNRRPKNREVKKSCEVDQNEHHNPLAIIPLPDQDADPIAVEHCNLNENAIRSNEP
VSSDISLKYRHLVNSPKPRKNINLLDSSGKSEDAESSDNAFLRSKFFSSSKLQKKSLGGL
DDMDLGNKWEGIKRKSKKGSHEGKYRSTYLRNNGEGRTHNYKDRTLNATAYKDLINSYLS
NINEIPVKEEAPITDQWKKHDTTNGVGQKKETEISHGEAEEEKAALDVLWKELEVSLASS
YFEESEVSNAIVPYEAEKNTKKDCEHDNRLDEEIGIYCIRCGFVTTDIRDVNPIFVENSV
WRQEEKQRDGVEDNEHTKADEDDDFRFFPTDVSPDKPISAENESVWSLIPELKDKLHVHQ
KKAFEFLWQNIAGSTDPRLIEEEYKKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRP
LVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFKQNNFASLPGVPKPTDDVKHVLD
CLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKFMAKVLRESPGLLVLDEGHNPRST
KSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFANEVLKALDPKYKRKKKG
AERKGAEKAQYLIESRARKFFLDNIAKKIDSNVGEERLQGLNMLRNVTNSFIDVYEGGSS
DDLPGIQIYTLLMNTTDIQHEILRKLHIDMAKCSGYPLELELLITLGSIHPWLVKTAVCS
QKFLTKEQLSDLDKYKFDLKIGSKVRFVLSLIYRVVKNEKVLIFCHNIAPVRLFQEYFEK
YFGWQKGREVLVLTGELELFERGKIMDKFEEPGGASKILLASITACAEGISLTAASRVIM
LDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSNMIFSEAF
VEDPSRWQAEKIEDDILREMVEEDKSKSFHMIMKNEKASSTNK
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaaaaggcagctaaatcagttgaggaatccattcaattctcacccctttgaa
gcagtttcctcgggctcatggcatccggtggagtcgataaaagttaagtcaggaactata
accatacatttcgcagataatcaccatatcactatggataaatgtacttcatcagacatt
cgaataagctcaaggaaagctattgtgtccgattgctcccgttttttacgtcctggaatc
gacatatgcgtgctaacaccccctcaacaagccaatgattcagctggtttaaatctagag
cctgtttggatggatgctagaataagttctatacaaagaaagcggcacgattccgagtgc
tcgtgtcagttttttgttaacttctatgttgatcaaggttcacttggtttagagatgaga
actctttgtaaggatatcaaagtattcggacttaatcagatttccatcctccaaaaagtc
gaccataatccttgtgaaaatcagccctaccggtggtcttcatccgaggattgctcttca
ttaccacacagtaaattgctattgggaaagtttctagccgatctttcatggttagttgtt
acgtcggttatcatgaaggtttctttcagtgcaagatcagttgaaaacaagatggtgtat
caaattttggtaggcgatagtactactagctcgttgtcgaacatcgagtctcatattgat
gttgtcagtttcaaaaatgacaatggcatgttagtaccaatcgtttctcaagttgctata
gctaacaccaagagagtttgtcaagcatacgaatcccatgcggatgaagcgtcgtcatct
tcaaatgctgacgggttacgacgctccaaacgcaggcatgtccagcccgagcgttacctt
ggttgcgaagttaaagagttggatgttggttcctttagaaacagtccgccggttaggata
aatacgtccaacaaagaagacgatatgtcgttgtctttagcgtgctttttgcgtttgcat
cataaccgtcaagaaaaggatgctgagaaatctcagaagtccgacagaccgaataccagc
caaaaacttctagtgtacaatcggaggcctaaaaaccgagaagtgaagaagtcttgtgaa
gttgatcaaaatgaacatcataatccacttgctattattcctctccctgatcaagatgcc
gatccaatagccgtggagcattgcaatctaaacgaaaacgctattagaagtaacgagcct
gtatcatctgatatatctttgaagtatcgtcatttggttaatagtcctaaaccaaggaaa
aacattaacttgttagattcatctggcaagtcggaagacgctgaaagtagcgataatgct
tttctgagaagtaaatttttcagctcctctaagctacaaaagaagagtttgggtggtttg
gatgatatggatcttggaaataaatgggaagggataaaaagaaaatccaaaaaaggttct
catgagggaaaatatcgttcgacgtatttaagaaataacggcgaaggaagaactcataat
tataaagacagaacattgaatgcaactgcatacaaggatttgataaattcatatttatcg
aatattaatgaaatacctgtcaaagaagaggcgcctattactgatcaatggaagaaacac
gacacaacaaacggagttggacaaaagaaggaaaccgagatttctcatggagaggctgaa
gaagaaaaagctgcactcgatgtactgtggaaagaacttgaagtgtcgctagcatcgagt
tattttgaagaatccgaggtttcgaatgcgattgttccttacgaggctgagaaaaatacg
aaaaaagattgtgaacatgataatagattggacgaagaaattggaatatactgcattaga
tgtggattcgtgaccaccgatatccgagatgttaatccaatcttcgttgaaaactcggtg
tggcgtcaggaggagaagcagcgtgatggagtagaagacaacgagcatacgaaggctgat
gaagacgatgatttccgtttctttccgaccgatgtctctcccgacaaaccaatatctgca
gaaaacgaaagcgtttggtcattaattcccgaactcaaagataagctgcacgtgcatcaa
aagaaagctttcgagtttctttggcaaaatatcgcaggctctaccgatccaagactaatt
gaagaagaatacaaaaaaagaggtggatgtgtgatctctcatactcctggagccggaaaa
acttttctcatcattgcttttctcgtaagctacttgaagttattcccggggaagcggcct
ctagttcttgcaccgaaaacaactctctatacttggtataaagagtttatcaagtgggag
attcctataccggtgtatctgattcacggtcgcagaacctatagagtattcaagcagaat
aattttgcttctcttcctggagttcccaagcctaccgatgatgtcaagcatgttttggat
tgccttgagaagatacaaaaatggcattcgcatccgagcgttcttatcatgggctacact
tcgtttttaacgttgatgcgagaggattcgaagtttgctcacagaaagtttatggctaaa
gtgttgagggaaagtcctggactattggtacttgatgaaggccacaatccgagaagcaca
aagtcgaggttgagaaaagttttgatgaaagtacaaaccgaattgaggatattactttcg
ggtactttgtttcaaaataacttctgcgaatacttcaatactctctgcttggcaagaccg
aaattcgctaatgaagtattgaaagcattagaccctaaatacaagaggaaaaagaaagga
gcggaacggaaaggagcagagaaagcacaatatttaatcgagtcacgtgctagaaagttc
ttcttagataacattgctaagaaaattgactcgaacgttggtgaggaaagattgcaaggc
ttgaacatgttgagaaatgtgacgaacagttttatcgatgtttatgaaggtggaagttcc
gatgatttgcctggtatacaaatttacacattgctcatgaacacaactgatatacagcat
gagattttgcggaaactgcatattgacatggctaagtgcagtggataccctctcgagtta
gagcttctgataacacttggatcgattcatccttggttggtcaaaaccgcggtatgttct
cagaagtttttaacaaaggagcaattgtctgatcttgataagtacaagtttgatttgaaa
ataggttcaaaagtccgatttgttttgagccttatctatcgcgttgtcaagaacgaaaag
gttcttatcttttgccacaacattgcaccggtgagactatttcaagaatatttcgaaaag
tactttggatggcaaaagggccgcgaagttttagtactaaccggggaactcgagctcttc
gaacgtggcaaaataatggataaattcgaggagcctggtggagcatcaaagatactactt
gcttcaatcacagcttgcgctgaaggcattagtttgacagcggcttcgcgtgtgatcatg
ctggattcagagtggaatccttcgaaaacaaagcaggctattgcacgcgcgtttcgtccg
ggtcagcagaaaatggtttatgtttatcagctcttggtgacaggctcgttggaggaagat
aagtatcgaagaaccacgtggaaagagtgggtgtcgaacatgattttcagcgaggcgttt
gtcgaggatccttctcgttggcaagctgagaagattgaagatgatattctgcgcgaaatg
gtcgaggaagataagtctaaatcatttcatatgatcatgaagaatgaaaaagcttcctcc
actaacaaataa
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