Vicia villosa (hairy vetch): 131621435
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Entry
131621435 CDS
T09680
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131621435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131621435
03016 Transfer RNA biogenesis [BR:
vvo03016
]
131621435
03029 Mitochondrial biogenesis [BR:
vvo03029
]
131621435
Enzymes [BR:
vvo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
131621435
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
131621435
Transfer RNA biogenesis [BR:
vvo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
131621435
Mitochondrial biogenesis [BR:
vvo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
131621435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
131621435
NCBI-ProteinID:
XP_058748464
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MGFFDLNIPYPETSTKSEKSTVENTRTRLAVKAMELGYTGIAYNRTMKGVMSDKHRCSIS
PLSLTTLLNIVPFLSSSAKLHRDLLGVQSSTPFRQYTRLTVCVENPLQGNALNDGNPILK
TYDLVAVKPLNQTAFDIACERMAVDIISIDFSAKLPFRLKQSMVKMATQRGVVFEVSYAG
LIADVQLRRQLISGAKLLIDWTRGRDVVFSSAAPSVNELRGPCDVANLLLLFGLSKEQAK
ASISNNCRVLLANALRRKRFHKEAIRVEVLSSDLASQSKEARHQELLKWDPLSSGDGDIL
LDDMENSRSISSKAPKTPKAIDFVSILDSLPSPGYKVQDFIPANDTFSLFSTNKANFVSV
AENVNRSTHVPNNSTKEPNRPDVFPKQDQSSSLNDITKHQIVRCGNIFEENIHSGTTEAC
RSEVIETETNGAKLELQNSINSDVHMDDMEKSLITPCKASTIAKATVDSYNNGNLLPVAE
NVDQSKPIVNNSTEQPDRLEVSPEQDERSLFDTVKAHHNVGCDDVFEKNIHNRTIEVFNS
KAEIDTQTNDTKTGLLNFIDSSVDCAPFEAKARDSQSDLCISSNMLDTVKPHENEKLIIS
SDDPNNIDEKLEVHEKDNENNTAVNLNAHFATVHENLPKEDFETAENTVLDMNTSTSETT
VGDGQFNRLQTDAVEVGEMPHQTLSDKMNTEDDSTVAIHSSPEVMMEDTKFDEVNTDSDQ
LASVPSVSGRLRVKRRTPPLQRTPPFLFPLKRLLNTVSFKKRCKKLKRKSNPE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttcgacctcaacatcccctacccagaaacctccaccaaatccgagaaatcc
accgtcgaaaacacccgaaccagactcgccgtgaaagccatggagctaggttacacagga
atagcttacaaccgcacaatgaaaggcgtaatgtccgataagcaccgttgctccatctcc
ccactctccctcacaactctcctcaacatcgttccctttctatcctcgtcggcgaagctt
caccgtgatcttcttggtgttcagtcttccaccccgtttcggcagtacacgcggctaacg
gtttgtgttgagaatccgttgcagggtaatgctcttaatgatgggaatcctattttgaaa
acttatgatttggttgctgttaagccgttgaatcagactgcttttgatattgcgtgcgag
agaatggcggtggatattatttcgattgatttttcggctaagttgccatttaggttgaag
cagtctatggttaaaatggctacgcagcgtggtgttgtttttgaagtttcgtacgctggt
cttattgctgatgtacagttaaggagacagttgatttccggtgccaagctgttgattgac
tggactcggggacgagacgttgtattttcaagcgctgctccttcagtgaatgaacttaga
gggccttgtgatgttgcaaatttgttgttattatttgggctctccaaggagcaagccaaa
gcatctatatctaacaactgtagggttcttttagccaatgctctaaggagaaagcgattt
cacaaagaggcaataagagtagaagttttatcatccgacttagcatctcaatctaaggaa
gctcgacatcaagagttactaaagtgggacccgctctccagcggtgatggtgatatcttg
ttggatgacatggaaaattctcgttcaatctcctctaaagcacccaagactccaaaagcc
attgactttgtttcaatactagacagccttccgtctccaggttataaagtccaggatttc
atacctgcaaatgatactttctcgctcttctcaactaataaggcaaacttcgtgtccgtt
gccgaaaatgtaaatcggtcaacacatgtacctaacaactcaaccaaagagcccaatagg
cctgatgtttttcccaagcaagaccaaagctcatcattgaatgatataacaaaacatcag
attgtgagatgtggcaatatttttgaggaaaatatacacagtggaactactgaagcttgt
cgttccgaagtgatagagaccgagacaaatggcgcaaagttggaactacaaaattctatt
aattcagatgtacatatggatgacatggaaaaatcacttataaccccttgtaaagcgtca
acaatagcaaaagcaaccgtcgacagctataataatggaaatttacttccagttgctgaa
aatgttgatcagtcaaaacctatagttaacaactcaaccgagcagcccgacaggcttgag
gtttctcctgagcaagatgaaaggtcattgtttgatactgtaaaagcacatcacaatgtg
ggctgtgacgatgtttttgagaaaaatatacataacagaactattgaagttttcaattcc
aaggcagagattgacactcagacaaatgacacaaagacaggacttctaaattttattgat
tcatctgttgactgcgccccatttgaagcaaaagcacgcgattcacagtcagacttgtgc
atctcaagtaatatgttggataccgtaaaaccacacgagaatgagaaactaatcatatct
tcagatgatcctaacaatattgacgagaaattagaagtgcatgaaaaagacaacgaaaat
aacactgctgtcaatttaaatgcacattttgcaacagtgcacgaaaatttgccaaaggaa
gattttgaaactgcagagaacacagttctggatatgaacacatctacttctgaaacaaca
gtgggggatggacaatttaacagactgcaaactgatgcagttgaagtcggtgagatgcca
caccaaacactgtctgataaaatgaatacggaagatgattccacagttgcaatacattca
tcaccagaagttatgatggaagatacaaagtttgatgaagtgaacactgattctgatcaa
ttagcctctgttccgtctgtttcaggtcgattgcgtgtaaagcgaaggacacctccactg
caaaggacacctccatttttatttccattgaagcgattgttgaatacagtgtcttttaag
aagagatgtaaaaagctcaagaggaaatctaatccagaataa
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