Vicia villosa (hairy vetch): 131622479
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Entry
131622479 CDS
T09680
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131622479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131622479
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131622479
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131622479
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131622479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_12
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
131622479
NCBI-ProteinID:
XP_058749496
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MEDPEGVLSFDFEGGLDAPPSAATASASVAAAPSGPIVQPDSYLPPSAASNGAAAPSVAE
PVSGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCV
YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNYNNSHKF
AQQRGSSYTQQVEKSQFPQGINSANQGVAVKPLAAESGNVQQQQQVQQPQPQVSQNQAQN
LANGQPNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV
ENVILVFSVNRTRHFQGCAKMTSRIGGSVPGGNWKYAHGTAHYGRNFSVKWLKLCELSFH
KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYVEPDSELMAISVAAESKREEEKA
KGVNPENEGENPDIVPFEDNEEEEEEESDEEEESFGNGVGPVVQGRGRGRGMMWPPHMHL
GRGARPMPGMQGFNPVMMGDGLPYGPPGPDGFGMPDLFGMGPRGFGPYGPRFSGDFGGPP
AAMMFRGRPSQPGMFPGGGFGMMMNHGRGPFMGGMGVPGPNPPRGGRPVNMPPMFPPPPP
PPQNMNRIAKRDQRTSDRNDRYSSGPEQGRSQDMLSQSGGPDDDMQYQQGYKSQQDDKND
DSESEDEAPRRSRHGEGKKRKGEA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcccgagggagtcctcagcttcgatttcgagggcggtctcgacgctcctcct
tccgccgccaccgcatccgcctccgttgccgccgcaccttctggccctattgtccagcct
gattcctacttaccaccttccgcggcctccaatggcgccgccgctccttccgttgctgag
cctgtttctggtaacgttcctggacgacggagcttccggcaaacggtttgtaggcactgg
cttcggagtttgtgtatgaaaggagatgcttgcgggtttttgcatcagtatgataaggct
cggatgccggtgtgcaggttttttagattgtatggagagtgtcgtgagcaggattgtgtt
tataagcatactaatgaagatatcaaggagtgtaacatgtacaagctaggattttgtcct
aacggacctgattgtcgatacaggcatgcgaagtctcctggacctccgcctccaattgaa
gaggtccttcagaagatccaacacttgtattcttacaattataacaattctcataagttt
gcccaacaaaggggttctagctatactcaacaagttgaaaagtctcagtttcctcaagga
atcaattctgcaaaccaaggcgtggctgtaaaaccattagctgcagagtcaggaaatgtc
cagcagcagcaacaagttcaacagcctcagccgcaagtcagccagaaccaagcgcaaaat
cttgctaatggccagcccaatcaagccaatcgaacatcaactcctttacctcaaggaata
tctaggtattttattgttaagagttgcaatcgtgaaaatttggagttatctgtacaacaa
ggagtatgggcaactcaaaggagcaatgaatcaaaactaaatgaagcatttgactctgta
gaaaatgtgatattggttttctcagtcaaccgtactcgacatttccagggttgtgcaaag
atgacttccagaattggtggttctgttcctggagggaactggaaatatgctcatgggacg
gcacattatgggcggaatttctctgttaaatggttgaagttatgtgaactgtcattccac
aaaactcgccatttgagaaatccatacaatgagaacttaccagtgaagattagtagagat
tgtcaggagctggaaccctctatcggtgagcagttggcatccttgctttatgttgaacca
gatagcgaacttatggctatctcggttgcagctgagtctaaacgagaagaggagaaggca
aagggagtgaatccagaaaatgaaggagaaaatccagatattgtcccatttgaagacaat
gaagaagaggaagaggaggaaagtgatgaagaggaggagagctttggtaatggtgtaggg
ccagttgttcaaggcagaggtaggggcagaggtatgatgtggccccctcacatgcatctc
ggacgcggagccagacccatgcctggaatgcaaggttttaaccctgtaatgatgggtgac
ggattaccctacgggcctcctggacctgatggttttggtatgccagatctttttggcatg
ggtccccgaggttttggtccatatggtcctaggttctctggtgattttggaggcccccca
gctgccatgatgttccgagggcgaccatcacaacctggcatgtttcctggtggtgggttt
gggatgatgatgaatcatggacgcggtccctttatggggggaatgggggttccaggtcca
aatcccccaagaggtggtaggccagtaaatatgcctccgatgtttccaccacctccgcct
ccaccacaaaatatgaaccgcattgccaagagagatcaaagaacaagtgatcgaaatgat
aggtacagttcaggaccagagcaaggtaggagtcaagacatgctcagtcaaagtggaggt
cctgatgatgacatgcagtatcagcaaggatacaagtcgcagcaggatgacaagaatgac
gatagtgaaagcgaagacgaggcacctaggcggtcaagacacggagagggtaaaaaaaga
aaaggcgaagcttag
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integrated database retrieval system
