Vicia villosa (hairy vetch): 131622761
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Entry
131622761 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131622761
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131622761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131622761
03041 Spliceosome [BR:
vvo03041
]
131622761
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131622761
Spliceosome [BR:
vvo03041
]
Complex B
Other components
Prp19-related factors
131622761
Complex C
131622761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
Mad3_BUB1_I
TPR_15
TPR_19
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
131622761
NCBI-ProteinID:
XP_058749786
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MAISQQLYPSEDDLVYEEELLRNPFSLKSWWRYLIALSDSPFSKRFIIYERALKALPGSY
KLWHAYLCERLQIVSSYPIILPQSKTLNDTSERTHPQFKILNDTFERALITMHKMPRIWI
MYLQTLTHQKFISRTRKVFDLALRALPVTQHDRIWDHYLFFVCQKGIPIETSLRVYRRFL
QFDPNRVEDFIEFLISSSLWQEAAERLALVLNDDKFYSIKGKTKHRLWLELCDLLTRHAN
EVSGLNVDAIIRAGIRKFSDEVGPLWTSLAEYYIRRGLHEKARDVFEEGMSTIITVKDFS
VIFDSYSQFEESVVRYKMEAKDEANDEEEEGGDEDDIQLSVIGCMMDTEAEANEEGDDED
IRFKYEHFEKKILSGLWLNDKDDIDLGYDRLDYLVDRRPELSSSVALRQNPHNVEQWHRR
VKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYEQHNDLANARVIFDKAVQ
VNYKTMDNLASVWCEWAELELKHENFEGALELMKRATAEPSVEVKQKVVAGGNQPVQMRL
HKSLRLWTFYADLEECLGNLESTREVYERILDLRIATPQVIINYAYFLEENNYFEDAFKV
YERGVKIFKYPHARDIWVTYLSKFVKRHGRTKLERARELFENAVEMSPADQVKPLYLQYA
KLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGL
PDKDVKAMCLKYAELERSLGEIERACGIYVFASKFADPRSDPDFWNKWHEFEVQHGNEDT
FREMLRIKRSVSASYSQTHFILPENLMPKDQTVCPHEAKDKLKEAGNTDDEMTALERQLA
PAADKTVTKKRKVGFVSAGVESHSDGRIKSNANHEEIELPEENDSDEEDQNEIALKDVPS
AIFGGLIRKRDKIENDGEVNCGNMLGALERIKKLKRI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctcaacagctttatccttcagaagatgatttggtttacgaagaggaactg
cttcgtaaccctttcagtctcaaatcatggtggcgatacctcatcgctctttcagattct
ccattcagtaagcgttttatcatctatgaacgagcactcaaagctcttcctggaagctat
aagctctggcatgcttacctctgcgaacgcctccaaatcgttagcagttaccccattatt
cttccgcagtccaaaacccttaatgacacttccgaacgtactcacccgcagttcaagatt
cttaatgatactttcgaacgtgctctcattaccatgcacaagatgcctcgtatatggata
atgtatctccaaacattgactcatcaaaaattcatatcaagaacaagaaaagtctttgat
cttgcactccgtgcacttcctgttactcagcacgaccgcatttgggatcattacctgttt
tttgtctgtcaaaaaggtatcccgattgaaacttctcttagggtttatcgcaggttcttg
caatttgaccctaatcgtgttgaagattttatcgagtttttgattagttctagtctttgg
caagaagcggctgagaggttggctttggtgttgaatgatgataagttttattctattaag
ggtaagacaaagcatagactttggttggagttgtgtgatttgttgactaggcatgcgaat
gaagtttctgggttgaatgtggatgcaatcattagggctggtattaggaaattctcggat
gaggttggtccattgtggacctcgcttgctgagtattacattaggaggggtttgcatgag
aaggctagggatgtctttgaggagggtatgtccactatcattactgtaaaggatttcagt
gtcatatttgattcctattctcaatttgaagagagtgtggttcgttacaagatggaagct
aaagatgaggcgaatgacgaggaagaggagggtggtgatgaagatgatattcaactgagc
gtgattggttgtatgatggatactgaagctgaggcgaatgaggagggtgatgacgaagat
attcgtttcaaatatgaacactttgagaagaagattttaagtgggttatggttgaacgac
aaagatgacattgacttgggatacgataggttagactacctggtggataggaggcctgaa
ttgtctagtagtgtagctttgcggcaaaatcctcataatgtagaacaatggcaccggaga
gtgaagctttttgagggtaatcccactaagcaaattctcacctatacagaggctgtgagg
accgttgatcccatgaaggcggtgggaaaacctcatacattatgggttgcgtttgccaag
ctttacgaacagcacaacgatcttgccaatgctcgggttatttttgacaaggcagtgcag
gttaactacaaaactatggataatctggctagtgtctggtgtgagtgggctgaattagag
ttgaaacatgagaatttcgaaggagcacttgagcttatgaagcgggctactgcagagcca
tcagttgaggtgaaacaaaaagtggtggctggtggcaatcaacctgttcagatgagactt
cataaatctttgagattgtggaccttctatgctgatttggaggaatgtctaggtaatttg
gagtctactagggaagtttatgaacggattttggatttacggatagccacaccacaagta
ataatcaattatgcatactttctggaggagaacaactactttgaagatgcttttaaggtt
tatgaaagaggagtgaagatatttaagtacccacatgctagagatatttgggttacatat
ctgtctaaatttgtgaagagacatggaaggacaaaattggagagagcgagagagctgttt
gagaacgcagttgaaatgtccccagctgatcaagtgaagcctctttatcttcagtatgct
aagctggaggaggactacggactagcaaaacgagctatgaaggtttatgatcaagccaca
aaggctgttcccaacaatgagaagttgagcatgtatgaaatatatattgctcgtgcagct
gagatatttggtgtacccaaaacacgagagatctatgagcaggcaattgaatctggtctt
ccggataaggatgtcaaagctatgtgtttgaagtatgccgagctggaaagaagtttggga
gaaattgagcgtgcttgtggtatatatgtttttgcttcaaagtttgctgatccacgatct
gatccagacttctggaataaatggcatgaatttgaggttcagcatggaaatgaggataca
tttagagaaatgcttcgaattaaacggagtgtgtctgcaagctacagccagacacatttt
atactgcctgagaatctgatgccgaaggatcaaactgtgtgtcctcatgaagccaaagac
aaacttaaagaggctgggaacactgatgatgaaatgactgctttagaaaggcaattagcc
cctgccgctgacaaaacagtgacaaaaaagagaaaagttgggtttgtaagtgctggagtg
gaatcacattctgatggaaggataaaatctaatgcaaaccatgaggaaattgagttacca
gaagaaaacgactccgatgaggaagatcaaaatgagattgcactaaaagatgtcccttct
gcaatttttggcggtttgattagaaagagggacaagattgaaaatgatggagaagtaaat
tgtggtaatatgcttggtgcccttgagagaattaagaaactgaaacggatttaa
DBGET
integrated database retrieval system
