Vicia villosa (hairy vetch): 131622765
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Entry
131622765 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131622765
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131622765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131622765
03041 Spliceosome [BR:
vvo03041
]
131622765
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131622765
Spliceosome [BR:
vvo03041
]
Complex B
Other components
Prp19-related factors
131622765
Complex C
131622765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_15
Mad3_BUB1_I
TPR_19
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
131622765
NCBI-ProteinID:
XP_058749791
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MPISQDLYPSEYDLVYEEELLRNPFSLKSWWRYLIALSHSPFSKRFIIYERALKALPGSY
KLWHAYLCERLQIVRSYPIILPHSKTLNDTSECTHPQFKILNDTFERALITMHKMPRIWI
MYLQTLTHQKLITRTRQTFDLALRALPVTQHGRVWDHYLFFVCQKGIPIETSLRVYRRFL
QFDPNCVEDFIEFLISSSLWQEAAERLASVLNDDKFYSIKGKTKHMLWLELCDLVIRHAN
EVSGLNVDAIIRAGIRKFSDEVGPLWTLLAEYYIRRGLHEKARDVFEEGMSTVITVKDFS
VIFDSYSQFEESVICYKMEAKYGPNEKEAKGDDEDVRFKYEHFEKKILSGLWLNDKDDID
LRLDRLQYLVDRRPELANSAILRENPHNVEQWHRRVKLFEGNPTKQILTYVQAVRTVDPM
KAVGKPHTLWTAFAKMYEQHDDLANARLIFDKAVQVNYKTVDNLASVWCEWAELELKHKN
FKGALELMRQATAEPSVEVKRKVAADGNQPVQMRLHKSLRLWTFYADLKESLGNLESTRA
VYERILDLRIATPQVIINYAYFLEENNYFEDAFKVYERGVKIFKYPHARDIWVTYLSKFV
KRHGRTKLERARELFENAVEMAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPN
NEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPNKDVKAMCLKYAELEKSLGETERA
RGIYVFASKYADPRSDPDFWNKWHEFEVQGGNEDTFREMLRIKRSVSASYIQTHFILPEN
LMPKDQTVCLDEAKDKLKEADDEMADLERQLAPAADKTVTKKRKVGFVSAGVESHSGRIK
SNANQEEIELPEENDSDKEDQNEITEKDVPSAVFGSLIRKRDEMETDGEVDGGNMLGALE
RIKKLKRI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttctcaagatctttatccttcagaatatgatttggtttacgaagaggaattg
cttcgtaaccctttcagtctcaaatcatggtggcgatacctcatcgctctttcacattct
ccattcagtaagcgttttatcatctatgaacgagcactcaaagctcttcctggaagctat
aagctctggcatgcttacctctgcgaacgcctccagatcgttcgcagttaccccattatt
ctcccgcactccaaaacccttaatgacacttccgaatgtactcacccgcagttcaagatt
cttaatgacactttcgaacgtgctctcattaccatgcacaagatgcctcgtatatggata
atgtatctccaaacattgacgcatcaaaaacttataacacgcacaagacaaacctttgat
cttgctctccgtgcacttcccgttactcaacacggtcgcgtttgggaccattatctgttc
tttgtttgtcagaagggtattccaattgaaacttctcttagggtttatcgcaggttcttg
caatttgaccctaattgtgttgaagattttatcgagtttttgattagttctagtctttgg
caagaagcggctgagaggttggcttcggtgttgaatgatgataagttttattctattaag
ggtaaaacaaagcacatgctttggttagagttatgtgatttggttattaggcatgccaat
gaagtttctgggttgaatgtggatgcaattattagggctggtattaggaaattctcggat
gaggttggtcctttgtggaccttgcttgctgagtattacatcagaaggggtttgcatgag
aaggctagggatgtctttgaggagggtatgtccactgtcattactgtaaaggatttcagt
gtcatatttgattcctattctcaatttgaagagagtgtgatttgttataagatggaagct
aaatatgggccgaatgagaaggaagccaagggtgatgatgaagatgttcgtttcaaatat
gaacactttgagaaaaagattttaagtgggttatggttgaatgacaaagatgacattgac
ttgagattggataggttacagtacctggtggataggaggcctgaattggctaatagtgca
attttgcgtgaaaatcctcacaatgtggaacaatggcacaggagggtgaagctttttgag
ggtaatcccactaagcagatactcacttatgtccaggctgtgaggactgttgatcccatg
aaggcggtgggaaaacctcatacattatggacagccttcgcaaagatgtacgaacaacac
gatgatctagccaatgctcggcttatttttgacaaggcagtgcaggttaactacaagact
gtggataatctggctagtgtctggtgtgagtgggctgaattagagttgaaacataagaat
ttcaaaggagcacttgagcttatgaggcaggcaactgcagagccatcagtcgaggttaaa
cgaaaagtggcggctgatgggaatcaaccggttcagatgagacttcataaatctttgaga
ttgtggaccttctatgctgatttgaaggaaagtctaggtaatttggagtctactcgagca
gtttatgaacggattttggatttacgaatagccacgcctcaagtaataatcaattatgca
tactttctggaggagaacaactactttgaagatgcttttaaggtttatgaaagaggagtc
aagatatttaagtacccacatgctagagatatttgggttacatatctgtctaaatttgtg
aagagacatggaaggacaaaattggagagagcgagagagctgtttgagaacgcagttgaa
atggctccagctgatcaagtgaagcctctttatcttcagtatgctaaactggaggaggac
tacggattagcaaaacgagctatgaaggtttatgatcaagctacgaaggctgttcctaac
aatgagaagttgagcatgtatgaaatatatattgctcgtgcagccgagatatttggcgta
cccaaaacacgagagatctatgagcaggcaattgaatctggtcttccaaataaggatgtc
aaagctatgtgtttgaagtatgctgagctcgaaaaaagcttgggagaaactgagcgtgct
cgtggaatatatgttttcgcttcaaagtatgctgatccacggtctgatccagacttttgg
aataagtggcatgaatttgaggttcagggcggaaacgaggatacatttagagaaatgctt
cgaattaaacgaagtgtgtctgcaagctacatccagacacattttatactgcctgagaat
ctgatgccaaaagatcaaactgtgtgtcttgatgaagccaaagacaaacttaaagaggct
gacgatgaaatggctgatttagaaaggcaattagccccagccgctgacaaaacagtgaca
aaaaagagaaaagttgggtttgtaagtgctggagtggaatcacattctggaaggataaaa
tctaatgcaaaccaggaggaaattgagttgccagaagaaaacgactctgataaggaagat
caaaatgagattacggaaaaagatgtcccttctgctgtttttggcagtttgatcagaaag
agggacgagatggaaactgatggagaagtagatggtggtaatatgcttggtgcccttgag
agaattaagaagctgaaacggatttaa
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