Vicia villosa (hairy vetch): 131622821
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Entry
131622821 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131622821
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131622821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131622821
03041 Spliceosome [BR:
vvo03041
]
131622821
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131622821
Spliceosome [BR:
vvo03041
]
Complex B
Other components
Prp19-related factors
131622821
Complex C
131622821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_19
NRDE-2
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
131622821
NCBI-ProteinID:
XP_058749837
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MSISQDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARTDSPFKKRCVIYERALKALPGSY
KLWHAYLRERLEVVRSLPVTHPEFITLNNTFERALVTMHKMPRIWIMYLQTRTHQKLITT
TRRTFDRALCALPVTQHDRIWEHYLFFVSQKGIPIETSLRVYRRYLQYDPNHIEDFIEFL
INSSLWQEAAERLASVLNDDKFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGG
IRKFSDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYSQFEESML
AFKMEEMDSDEEDEENEDGANEKEEEEEEDEDVRFKYEDFEKNIFSGFWLNDKNDIDLRL
ARFDYLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAV
GKPHTLWVAFAKLYEQHNDLANARVIFDKAVQVNYKTVDNLASIWCEWAELELKHKNFKG
ALELMRRATAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFYVDLEESLGDLESTRGVYE
RILDLRIATPQVIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRY
GRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEK
LSMYEIYISRAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELERSLGEIERARGI
YVFASKFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQ
KDQTVNLDEAKDKLKEAGIPEDEMAALERQLAPAADKTATKERKVGFVSAGVESQSDRGI
KSNANHEEIELPEENDSDDDDDDKIEIAQKDVPSAVFGGLIRKRDEIENDRDVDGNAKEK
DNETRLGALERIKKLKRN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttcgcaggatctctatccatctgaagacgatttggtttacgaagaagagctt
cttcgtaaccctttcagtctcaagctatggtggcgatacctaatcgctcgcacagattcg
cctttcaaaaagcgctgtgtgatttacgaaagagcactcaaagctcttcctggtagctac
aagctctggcacgcttacctccgtgaacgcctcgaagtcgttcgtagcctccctgtcact
cacccggagttcataaccctcaacaacaccttcgaacgtgcgcttgtaacgatgcataag
atgcctcggatttggataatgtatcttcaaacacgtactcaccagaaacttattactact
acaagaagaacctttgatagagcactctgtgcacttcctgttactcagcatgatcgaatc
tgggagcattatctgttctttgttagtcaaaagggtataccgattgaaacctctcttagg
gtttatcgtaggtatttgcagtatgaccctaatcatattgaggattttattgagtttttg
attaattctagtctttggcaagaggctgcggagaggttggcttcggtgttgaatgatgat
aagttttattctattaagggtaagacaaagcataggctttggttggagttgtgtgatttg
ttgactaggcatgcgaatgaagtgtctgggttgaatgtggacgcgattattaggggtggg
attaggaaattctcggatgaggttggtcgattgtggacctcgcttgctgagtattatatt
aggaggggtttgcatgagaaggctagggatgtgtttgaagagggtatgtctactgtcatt
actgtgagggattttagtgtcatatttgattcctactcccaatttgaagagagtatgctt
gcttttaaaatggaagaaatggatagtgacgaagaagatgaagaaaatgaagatggggcg
aatgagaaggaagaggaagaggaggaggatgaagatgttcgtttcaaatatgaagacttt
gagaagaatatttttagtggcttttggctgaatgacaaaaatgacattgacttgagattg
gctcggtttgactatctcatggataggaggcctgaattggcgaatagtgtacttctgcgg
caaaatcctcataatgtagaacaatggcaccggagggtgaagctttttgagggtaacccc
actaagcaaattctcacctacacggaggctgtgaggaccattgatcctatgaaggcggtg
ggaaaacctcatacgttatgggttgccttcgcgaagctttacgaacagcacaatgatctg
gccaatgctcgggttatttttgataaggcagtgcaggtaaactacaaaactgtggataat
ttggctagtatctggtgtgagtgggctgaattagagttgaagcacaagaatttcaaagga
gcacttgagcttatgaggcgagcaactgcagagccatcagttgaggtgaaacgaaaagtg
gcggctgatgggaatcaaccggttcagatgaaacttcataaatctttgagattgtggacc
ttctatgttgatctggaggaaagtctaggtgatttggagtctactcggggagtttatgaa
cgaattttggatttacgaatagccacaccacaagtaataatcaattatgcatactttctg
gaggagcacaaatactttgaagatgcatttaaggtttatgaaagaggagtgaagatattt
aagtatccacatgttaaggatatttgggttacatatctgtctaaatttgtgaagagatat
ggaaggacaaaattggagagagcaagagagctgtttgagaatgcggttgaaacggcgccg
gctgatcaagtgaagcctctctatctgcagtatgctaagctggaggaggattatggacta
gcaaagcgagctatgaaggtttatgatcaagctacgaaagctgttcccaacaatgagaag
ttgagcatgtatgaaatatacatttctcgtgcagctgagatatttggcgtacccaaaaca
cgagagatctatgagcaggcaattgaatctggtcttccagataaggatgtcaaagctatg
tgtttgaagtatgctgagctggaaagaagtttgggagaaattgaacgtgcccgtggtata
tatgtttttgcttcaaaatttgctgatccacgatcggatccagacttctggaataaatgg
catgaatttgaggttcagcatggaaatgaggatacatttagagaaatgcttcgaattaaa
cggagtgtgtctgcaagctacagccagacacattttatactgcccgagtatctgatgcag
aaggatcaaactgtgaatcttgatgaagccaaagacaaacttaaagaggccgggatccct
gaggatgaaatggctgctttagaaaggcaattagccccagctgctgacaaaacagcgaca
aaagagagaaaggttgggtttgtaagtgctggagtggagtcacagtccgacagagggata
aaatctaatgcaaaccatgaggaaattgagttaccagaagaaaatgactctgacgacgac
gatgatgataagattgagattgctcagaaagatgtcccctctgctgtttttggtggtttg
attagaaagagagacgagattgaaaatgatagagacgtagatggtaatgctaaagaaaag
gataatgaaacccggcttggtgctcttgagagaattaagaagctgaaacggaactaa
DBGET
integrated database retrieval system
