Vicia villosa (hairy vetch): 131623718
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Entry
131623718 CDS
T09680
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131623718
03036 Chromosome and associated proteins [BR:
vvo03036
]
131623718
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131623718
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
131623718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
Motif
Other DBs
NCBI-GeneID:
131623718
NCBI-ProteinID:
XP_058750722
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MAKGVISDDEDEVEMDEREPVDGEEMEEGGRDMDEDDEDEEEEEGQDEYEKDGFIVDEIE
EEEEQDEEERADSDEERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GQRDEEGQSGQSDEEEFYGSGKVGRTAEEKLKRSLFGDDEGTHLEDIAEEEEQGEEEEDA
DIGEEDEMADFIVDEEEVDENGAPVRTKKPKGVRRTRQAPGVSSSALQEAQELFGDVDEL
LLARSRSRGSDDYKETRLEDEFEPIVLSEKYMTENDDRIRESDIPERMQILEESTGAPSL
DENSIDEESQWIATQVISGAVPWIPKLVSKSNSKLDSDSKNNGKDEDLPIDKDDIVRPNN
GMDEDLPTDKDDTVRFKDRKYEDLPIDMNDIVRFLKLHHVQKLDIPFIAMYRKEECLSLL
KDLPEAGNDNWDKNNKTPTLKWHKTLWALQDLDRKWLLLQKRKNALQLYYNKRSEEESRR
VYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKRKS
MYSTFSKAGLWEVASRFGSSSEQIGLCLSVVQLHEFVDPKETPEEVASNFTCAMYDTPEE
VLKCARHMAAVEISCEPNIKKYVRNHFIDHAVVSTSPTPDGNTTIDSFHQFSGVKWLREK
PLNKFEDAQWLLIQKAEEDKLIQVTIKLPEEHLNKLIDQFNEYYISDSVSRSAQLWNEQR
KLILQDAIFRFLLPSMEKEARGVLASKAKHWVLTEYGKALWSKVSVGPYQQKENDLSSDD
EAAPRVMACSWGPGKPQTTFVMLDSSGEVQDVLYTGSLTLRSQNVHDQQRKKNDQERVLK
FMTDHQPHVVVLGAANLSCTRLKEDIYEVIFKMVEENPRDVGHEMDGLSIVYGDESLPRL
YENSQISSEQLPSQQLGIVRRAVALGRFLQNPLAMVATLCGPKKEILSWKLTPWESFLNP
DDKIGIVEQVMIDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGSIY
TRKDFVTDHQLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYVLAQELAKD
VYDEDGTGDANDDDDALEMAIEHVRDRPSYLKNLAVEQYAEDNERKDKIETLYDIRRELI
QGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKMVQVTVRRVQAQRAICGLESGMTGIL
MKEDYADDLRDIIELSDRLHEGDMLTCKIKSIQKNRYQVFLVCKESEMRSDRLHHNHNFD
PYYHEDRSSLPNEQDKIRKERERSKKNFKPRMIVHPRFQNITTDEAYEFLSDKDPGESIF
RPNDKGPSYLTLTLKIHDGVYAHKEIIEGGKELKDITSLLRIGKTLKIGEDTFEDLDEVM
DRYVDPLVTHLRTMLNYRKFRTGLKTEVDELLKTEKEENPMRIVYSFGICHEHPGTFVLT
YIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPM
RSPATGGSSGASVGSGWGGSNSEGGWRGGHSYDRDRSSTPGSRTGRPDYRNNGNRDEHPS
GLPRPYGGGRGRGRGSYNNSSRGHNNNERRAGATRWGAAVKDGDDSLSNFPGAKIQNSPG
REAFPGGWGGSSGWGGGASGDKSGWGGGASAGDKNGWGGGASGGDKSGWGGGASTDDKSG
WGGGASGGDKSGWGGGASGGDKSGWGAGTSDAEQGNSGWGTGSKKAGDNGWSGN
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtgatatctgacgacgaagatgaggttgagatggacgagagagagccc
gttgatggtgaagaaatggaagagggaggtcgagatatggacgaggatgatgaggatgaa
gaagaagaggaagggcaagatgaatatgaaaaggatggatttatagttgatgaaattgag
gaagaagaggagcaggatgaagaagaaagagcagacagtgacgaagagcgtcagaagaag
aaaaagaggaagaaaaaggaggagtatgtccttgatgaagatgattatgaactgttggag
gacaacaatatcaatattcatcgtcggaaggaaagcaaaaagttcaaaagattaaaaaag
ggccagagggatgaggaggggcaatctggacaatctgacgaagaagagttttatggaagt
ggtaaggttgggcgaactgctgaggagaaacttaaacgcagtttatttggcgatgatgaa
ggaactcatcttgaagacattgccgaagaggaggagcaaggagaagaggaggaggatgct
gacatcggggaagaagatgaaatggccgacttcattgtagatgaagaagaagttgatgag
aacggagcccctgtgaggactaagaagccaaagggtgtaagaaggactaggcaggcaccg
ggagtctcgtcctcagctttacaagaagctcaagaattattcggtgatgtcgatgagttg
cttttagctcgcagtcgtagtcgaggatccgatgattacaaagagactagacttgaagat
gaatttgagcctattgttctctctgagaaatatatgacagagaatgatgaccgaataagg
gagtccgatattccagagagaatgcagatattagaggagagtaccggtgctccttcactg
gatgaaaatagtatagatgaagagagtcagtggatagctactcaagttataagtggggca
gtcccttggattccaaagttagtttcaaagtcaaattcaaagttagattcagactccaaa
aataatgggaaggatgaggatctaccaattgacaaggatgatattgtcagacctaataat
gggatggatgaggatctaccaactgacaaggatgatactgtcagatttaaggatcggaag
tatgaggatctaccaattgacatgaatgatattgtcagatttttgaaactgcatcatgtc
caaaagttagatattccttttattgccatgtatcggaaggaggagtgtttgagcttattg
aaagacctacctgaagctggaaatgataattgggataagaataacaaaacacctactcta
aaatggcacaagacactttgggctctacaggacctggacaggaagtggctgcttcttcag
aagcggaagaatgcccttcaattatactacaacaaacggtctgaagaagagtctcgtcgt
gtatacgatgaaacaagactaaacttgaataggcaattgtttgaatcagttatgagatca
ctgaaggaggcagaatcagagagggaggttgatgatgttgactcgaagttcaacttgcat
ttcccaccaggtgaagctggtgttgatgaagggcagtacaaaaggccaaagcggaaatca
atgtatagcactttcagtaaggcaggtctgtgggaagttgcaagcaggtttgggtctagc
tctgagcaaattggattatgtctatctgtagttcagctgcatgagtttgtagatccaaag
gaaactccagaagaggtggcttctaacttcacatgtgccatgtacgatacccccgaagaa
gttcttaaatgtgctaggcacatggcagctgttgagataagttgtgagcccaacataaag
aaatatgttcgtaaccactttattgaccacgccgtggtgtcaacctccccaactcccgat
ggaaatacaacgatagattcgttccatcagttttctggggtgaaatggctgcgagagaag
cctttgaataaatttgaggatgcccaatggctccttatacagaaggcagaagaagacaaa
ctcattcaagttactattaagcttcctgaagaacatcttaataagttaatagaccaattc
aatgagtattacatcagtgatagtgtcagcaggtctgctcaactgtggaatgaacagagg
aagctgatactgcaggatgcaatttttcgatttcttttaccatcaatggaaaaagaagca
agaggtgtcttagcaagcaaagcaaagcactgggtacttactgagtatgggaaggctttg
tggagtaaggtttctgtggggccttatcaacaaaaggaaaatgatcttagctcggatgat
gaggctgctcctagggttatggcctgctcttggggccctggaaagccacaaacaactttt
gttatgttagattcatcgggagaagtgcaagatgtgctatacactgggtcgcttacttta
aggtcacagaatgtccatgaccaacaaaggaagaagaatgaccaagaacgcgtattgaag
tttatgacagatcaccaaccacatgttgttgttttaggagcagctaacttgtcttgcact
cgtttgaaagaagatatttatgaggttatttttaagatggttgaggaaaatcctagagat
gttgggcatgaaatggacgggctcagcattgtgtatggtgatgaatctctgccccgtctt
tacgaaaattcccaaatttcctctgaacaacttccttcgcagcagctaggtatagtgagg
cgggctgttgctcttggtcgatttctccagaacccattagcaatggttgcaacattatgt
gggcccaaaaaggaaatattgtcatggaaactgaccccttgggagagttttctaaacccg
gatgataaaattgggatagttgagcaggttatgatagatgtgaccaatcaggtgggctta
gacattaatttagcaataagtcatgaatggttatttgctccgttacagtttatttcgggg
cttggtccgcggaaggctgcatccttgcagagatcgctagttagagccggctcaatttat
accaggaaggattttgtgacagatcaccaacttggtaaaaaggtgtttgtcaatgcggtt
ggtttcttgcgtgtccggcgaagtggattggctgctagcagcagccaatttattgatttg
ctggatgatacacgaattcatcctgaatcatatgttcttgctcaagagttggccaaagat
gtctatgacgaagacggcacgggtgatgcaaatgatgacgatgatgccttagagatggcc
atagaacatgtgagagatcggcctagttatttgaaaaatctggccgtggagcaatatgct
gaagacaatgaacgtaaagacaaaattgaaactttatatgatataagaagagaattgatt
caaggttttcaggattggcgtaagcaatatgaagaaccaagtcaggatgaggagttctat
atgatttcaggcgagactgaggagactctcgctgaaggtaaaatggtccaggttacagtt
cgccgagttcaagcccaaagggcaatatgtgggcttgaatctggaatgaccggaatcctt
atgaaagaagactatgcagatgacttgagagatataattgaattatctgataggctacat
gaaggtgacatgctcacttgtaaaatcaagtcaatccaaaaaaataggtatcaagtcttc
cttgtttgtaaagaaagtgaaatgagaagtgatcgattacatcacaaccacaactttgat
ccctattatcacgaagaccggagttccttgccgaatgagcaagacaaaattcggaaagaa
agggagcgttcaaaaaagaatttcaagcctaggatgattgttcatcctagatttcaaaac
ataactaccgatgaagcatacgagttcttgtcagacaaggatcctggtgaaagtattttt
cgtcctaatgataagggtccatcatatcttactttgactcttaaaattcatgatggagta
tatgcccacaaggagataattgaaggcgggaaggaactgaaggacatcacaagcttactt
cgaatcggaaagacgcttaaaattggagaggatacttttgaggatttagatgaggttatg
gaccgatatgttgatcccttggttactcatttaagaacaatgttaaattatcgcaagttc
aggacgggtttgaaaacagaagttgacgaacttttgaagaccgaaaaggaagagaatcca
atgcgtatagtttatagttttggcatctgtcatgaacatcctggcacatttgtattgact
tacataagaagtacaaatccacaccatgagtacattggtctttaccccaagggattcagg
ttccgcaaaaagatgtttgaggatattgaccggcttgtggcatattttcaaaggcacatc
gatgatccacaaaatgattcagcaccttccattagatcagtagctgcaatggtgccaatg
cgaagccctgctactggtggctcatcaggggcatctgtgggtagtggctggggtggttcg
aacagcgagggtggttggagaggaggtcactcgtatgatagggatcgatcttctactcct
ggttccagaacaggacgacctgattacagaaataatgggaatcgagatgaacaccctagt
ggattgccgcgtccatatggtggtggacgagggcgtggccgtggttcttataacaatagt
agtagaggacacaacaacaatgaaaggcgtgccggtgcaaccagatggggagctgccgtg
aaagacggggatgacagtttaagcaacttcccaggggctaagattcaaaactcccctgga
agagaagcatttccgggtggttggggtggaagtagtggttggggaggtggagctagtggt
gacaaaagtggctggggaggtggagccagtgctggtgacaaaaatggttggggaggtgga
gctagtggtggtgacaaaagtggctggggaggtggagctagtactgatgacaaaagtggc
tggggaggtggagctagtggtggtgacaaaagtggctggggaggtggagctagtggtggt
gacaaaagtggctggggtgctggtacaagcgatgctgaacagggaaattccggctgggga
actggatccaagaaagctggcgacaatggatggtctggaaactaa
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integrated database retrieval system
