Vicia villosa (hairy vetch): 131625002
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Entry
131625002 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131625002
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
vvo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131625002
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131625002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131625002
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131625002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
131625002
NCBI-ProteinID:
XP_058751898
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MDKGKGGRHRETSDTDDHSHRNKADDASGVKNNGVNNKKSPPARPMPSVQNAGAVSFPGA
GGNGQKQPVLGVGVGSTSFFLSNLHWWTTDADVEYELCKYGEVRDLSFFLYDDCGKSKGY
CKVEFYDPLAAAACKKGLDGHRFNGRPCVVSSSWTPFLGTNQPDVDNKGMKEPNQVEATK
PGDENDGRGGIKEGGDGDNSGKKGPDEVEATKPGVGNGGRGGAKEGGDGDNRGYGRGNWG
RGNNLGRGSRGHGNLMRNRGGGMGGRSIMMGGSMGRTGGAAPRMLMHPRMGPMSRMGGDA
CFPGGPIPQSSGNLPSYLSVGLRGVAPYGNYSFCGRGMPMRGKGMIPRSGMGGPNMGRLG
GDEHGGGKAAGASYGEEAASDHQNDEVDRDRGDSPNAMREKDRGSERDLPGTSERTFKDD
RVPVFDRYVPSENDSEHDHPEIGNLDDREISRARSRDSDIDREQSRSRDHVPDRERGWNR
DRGDLPNAMREKDRGSERDLPGTSERTFKDDRVPEFDRYVPTENDSEHDHPEIGNLDDRE
ISRARSRDSDIDRERSRSRDHVRDHERGWNRERQRQDRDGYADHPRLTDHAPQHNDEQER
GQSTKPSIKSRLSYPTRKYSHNGKRR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaggcaaaggaggaaggcaccgtgaaacatctgataccgatgatcactcccac
cgcaacaaagccgacgatgcttcaggagttaaaaacaacggagttaacaataagaagtcg
ccaccagcacggccaatgccgtcagttcaaaatgcgggtgcggtttcgtttccaggggcc
ggtggaaatgggcaaaagcaaccagttttgggtgttggtgtaggaagtacttcatttttt
ttgagtaatttgcactggtggactactgatgctgacgttgaatacgagctttgtaagtat
ggagaagttagggatttaagtttttttctttatgatgattgtggaaaatccaaagggtat
tgtaaggttgagttttatgatcctttagctgcagctgcttgtaagaaagggttggatgga
cataggtttaatggtagaccgtgtgttgtttcttcgtcttggacgccttttcttggtacg
aatcaacctgatgtggataataagggaatgaaggagcctaatcaggttgaggctactaag
cctggtgatgaaaatgatgggagaggtggtatcaaagaaggtggagatggggataattcg
ggaaagaaggggcctgatgaggttgaggccactaagcctggtgttggtaatggtgggaga
ggtggtgccaaagaaggtggagatggggataatagaggttatggaagaggtaattggggg
agagggaacaatcttgggagggggagtagaggacatggtaatctgatgaggaatcggggc
ggtggaatgggtggtagatcgatcatgatgggtggttccatgggtagaacgggtggtgct
gccccacgaatgttgatgcatcctcggatgggtcctatgagtagaatgggtggggatgca
tgctttcccggtggcccgatacctcagtcctctgggaatttgccttcatacctcagtgtt
ggtttgcgcggtgtagcaccttatggtaattattctttctgtggaagagggatgcctatg
cgtggtaaggggatgattccgcggtcaggtatgggtggtcctaatatgggaagattgggt
ggtgatgaacatggtggaggcaaggctgcaggggcaagttatggggaggaagctgcatct
gatcatcagaacgatgaggtggatcgtgatagaggtgattcgcctaatgctatgcgcgaa
aaagatagaggatcagagagggatttgccaggtacgtctgaaagaacattcaaggatgat
agagttcctgtatttgacagatatgtgcctagtgaaaatgattcggagcatgaccatcca
gaaatagggaatcttgatgatagagaaattagtcgtgcacgatctcgggatagtgatata
gatcgtgaacaatcacgatctcgagaccatgtccctgatcgcgaaagaggttggaatcgt
gatagaggtgatttgcctaatgctatgcgcgaaaaagatagaggatcggagagggatttg
ccaggtacatctgaaagaacattcaaggatgatagagttcctgaatttgacagatatgtg
cctactgaaaatgattcggagcatgatcatccagaaatagggaatcttgatgatagagaa
attagtcgtgcacgatctcgggatagtgatatagaccgtgaacgttcacgatctcgagac
catgtccgtgatcacgaaagaggttggaatcgtgaaaggcagaggcaagatagggacgga
tatgctgatcatcctagactcacagaccacgcgccacagcacaatgatgagcaggagagg
ggacagtcaacaaagcctagcatcaaatcacgattatcatacccgactagaaaatattca
cataatggaaaaaggagatag
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