Vicia villosa (hairy vetch): 131625146
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Entry
131625146 CDS
T09680
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131625146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131625146
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131625146
mRNA degradation factors
5'-3' decay
Decapping complex
131625146
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
131625146
NCBI-ProteinID:
XP_058752026
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Position
Unknown
AA seq
878 aa
AA seq
DB search
MVDMDGFGGGGDVGGRPNNGDLRQLADVPTGGAVFDASQYAFFGKDAVQEVDLGGLEDNA
HLPTSESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKVVSGPRNPGVIGERGSRENS
TSDLAQREDVHSWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQQRQD
QNYHLQHCSSEPVHNWLDQQIYDIETAHDDKRWSSQPHTSIPHLHEPTSLYRTSSYPDKQ
PELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSQSTGHLNIPYHTGAAAQMALSSQNRS
HFSNSALQLSGLNLGSHFGGNTRQFLSGSSSLNQRIQNQLINQAGLYPGDRSNLLNNMLQ
QQLQLHNGPVSPHLMNQLQQQHRLHHPVQQSAGYLSGFQSHLFNPHLSSSSSVSSKYDHR
PKSSQKGKHSHRLSHQGSDASSQKSESCSLQFRSKHMTSDEIESILRMQLAVTQSNDPYI
DDYYHQGRLAKKPSVAKLKHPFCPTQIKELPSRTRSSNDPHAFLQVDTLGRVSFSSIRRP
RPLLEVDPPNSSVPGSSELKISEKPLEQEPTFAARVTIEDGLCLLLDVEDIDRFLQSNQP
QDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRIVSVFKGRKLLAK
YLQLLLPGSELMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCNLAKVVCQCVRGMDLGALS
ACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLERATELLTDPHAACNYNMGNRSFWQA
SFDEFFGLLTKYCMSKYHSIMQSLLIQSTPNMDDIGSDAAKAISNEMPVELLRASLPHTD
DRQRKLLLDFAQRSVPVVGFNSNSGGSGGLLNSETVLS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatggatttggaggtgggggtgatgttggaggacgtcctaataatgga
gatcttaggcaattggctgatgttcccacaggaggtgctgtttttgatgcatcacaatat
gcattctttgggaaagatgctgtccaggaagttgatttgggaggtttagaggacaatgcc
catttgccgacttctgagtctaacgaggaggagttcttttttaatagagaacaggatgag
gatgtaagatctctttctgatattgatgatcttacgaccaccttttggaagttgaacaag
gttgtcagcggtccaagaaacccaggtgttattggtgaacggggatcaagagaaaactct
acatctgatttggcacaaagggaagatgttcatagctggtttgatcagaatgcttatgac
agtgaaggttcaattgatggaaaaagatggtcatcacagccccaatcttctcttgcccat
ttacaaaattcaaagtccttgtacagaacatcttcatatcctgagcagcaaaggcaggat
caaaactaccacctccaacattgttctagtgagcccgttcacaactggcttgatcagcag
atttatgatattgaaacagctcatgatgacaaacggtggtcatctcagccgcatacctcc
attccacacttgcacgaaccaacatccttgtacagaacatcttcatatccagacaaacaa
ccggagcttacacgtttttctagtgagccaatattggtacagaagtcttcattcacttct
tatcctccgccaggtggtcggtctcagcagggttctccaagtcaaagtacaggtcactta
aacattccttatcacactggagcagcagctcagatggcgctatcatctcaaaatcgttca
catttctccaattctgctctacagttgagtggattaaacctcgggtcacattttggtgga
aacacacgccaatttcttagtggttcctcctctcttaatcaacgaatacagaaccaattg
atcaaccaagcagggttatatccaggagatcgttccaacctcctcaataatatgttgcag
caacaattacagcttcataatggaccggtttctcctcacttgatgaatcaattgcaacag
cagcacagactgcaccatcctgttcagcaatctgcaggctacttgtcaggttttcagtct
catttatttaacccccacctttcctctagctcatccgtcagtagcaagtatgatcataga
ccaaaatcatctcaaaaaggtaaacatagtcatcggttatcccatcagggttctgatgcc
agtagccagaagagtgaaagctgttcgttacagtttcgctccaaacatatgacaagtgat
gaaattgagagtattcttagaatgcagcttgctgtcactcaaagtaatgatccatacata
gatgactattaccaccaaggccgtcttgcgaaaaaaccttctgtggcaaagttaaaacat
ccgttttgcccaacccaaataaaggaacttccttcacgaacacgttctagtaatgatcca
catgcatttcttcaggttgataccctagggagggtttcattttcgtccattcgtaggcct
cgccctcttctcgaggttgatcctccaaactcttctgttcctggtagctctgagctaaag
atttcagaaaagcctctcgaacaggagcctacatttgctgctagagtcacaattgaagat
ggtctttgtcttcttcttgatgtagaggatattgatcgtttcctacagtctaatcagcca
caagatggtggaacacaattaagacgaagaaggcaggtcctgttagaagggctagctact
tcacttcaactagttgacccgctgggaaagaatggacataaggttgggcttgcagctaag
gatgaccttgttttcttacggattgtatctgtctttaagggtcgcaagctccttgcaaag
tatcttcaattgcttctacctggtagtgagcttatgcgaatagtctgcatgactgtcctt
cggcatttaagattcttatttgggggtctcccctcagaccctgctgctgcagtgactaca
tgcaaccttgccaaagttgtttgccaatgtgtcagaggaatggatcttggtgctcttagc
gcctgtcttgctgcagttgtttgttctgcagagcatcctcctctacgccctgttggaagc
actgctggagatggtgcttcccttattttggtatctgttcttgagagggctaccgagctt
ctaaccgatccacatgcagcctgcaactataatatgggtaatcgatcgttttggcaggcc
tcatttgatgaattctttggccttcttaccaagtattgcatgagtaaataccatagtatc
atgcagtccctgcttatacaaagcactccaaatatggatgacattggatcagatgctgct
aaagctattagtaatgaaatgcctgttgaactcttgcgtgcaagcctccctcatactgat
gaccgccaaaggaagcttttactggattttgcccagcgatctgttcctgtggttggattt
aacagtaactccggaggaagcggaggtcttctgaattcagagacagtgctaagttga
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