KEGG   Vicia villosa (hairy vetch): 131625148
Entry
131625148         CDS       T09680                                 
Name
(RefSeq) protein PAT1 homolog
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131625148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvo03019]
    131625148
Messenger RNA biogenesis [BR:vvo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131625148
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     131625148
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 131625148
NCBI-ProteinID: XP_058752027
LinkDB
Position
Unknown
AA seq 819 aa
MVEMDGFGGGDDVGGDLHQFGDVPKEGAVFDATQYAFFGQNARVEEVELGGLEDDDCLPE
SNEEEFLLNNREEVEDVKSLSDIDDLSSALWKLNKVEIGPQSTTIIGARGSRENSTAEWT
RRNNDLNWFDQNPYDSEGSLDGRRLPPQPYSSLAPLQESNSLYRTSSYPEQQRPQQPYLQ
HGSNESVPNWFDQSFRDSETQDSKRWSSQPHSSIAHIEESKSLYSTSLYPDKQQDLHFSN
DSMLAPNSSFTSYPPPGGRSQQASPSHNTGPLNIPYHAVGAQMALSPQNRSHLSNSALQL
GGLNHGAPFGGNIRQFPMGSPLNQRMPNHLVNQAGPYNGVHPNISSGLPMVNKYDQMLGM
MELRDQMPKPAPMGRQNLRFSPQGFDASNHNKFNNGWPRFRSRYMTTEELENIFRLQLAA
THSNDPYVDDYYNQGCLAKKSSGAKLRRHFSPAQIREIPLRASANEPHAFLQVDALGRVP
FSSIRRPRPLLEVDPPNSSRAVGPDQNISEKPLEQEPMLAARVLIEDGLCVLLDVDDIDR
FLQFNKQLQDNGDHLKRKRKGLLEGLSASLQLVDPLGKNGHAVELAAKDDFVFLRIVSLP
KGRKLLARYLQVLFPGGELMRIVCMTIFRHLRFLFGGLPSDPAAAETVINLAKVVSKCIR
EMDLVSLSVCLASVVCSSEPPPLRPLGSPAGDGTSLILASVLERATELLTDPHAASNYNI
RNRSLWQASFDEFFGLLTKYCVNKYDSIMHSFLTQGTPNMAIIGPDVARAISREMPVELL
RASLPHTDDRQKKILLDFAQRSVVGYNSNSGGNGHHVNS
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggtagagatggatggatttggtggcggggatgatgttggtggagatcttcatcaattt
ggggatgttcccaaagaaggtgcagtttttgatgcgacgcagtatgcatttttcggtcaa
aatgcacgcgtagaagaagttgaattgggagggttagaagatgatgactgtttgccggag
tctaatgaggaggagttccttcttaataatagagaagaggttgaggatgttaaatctctt
tctgatattgatgatctcagctctgctttatggaagttgaacaaagttgaaattggacca
caaagcacaacaattattggtgcacggggatcaagagaaaattctacggctgaatggaca
cgaaggaataatgatcttaactggtttgaccagaatccttatgatagtgaaggttctttg
gatggaagaagactgccaccacagccttattcttctcttgcccctttgcaggaatctaat
tccctgtatagaacttcttcatatcctgagcagcaaaggccgcaacaaccctaccttcaa
catggctcaaatgaatcagttcctaattggtttgatcagtcttttcgtgattctgaaaca
caggacagcaaacgatggtcgtcacagccacattcctccattgcacacatagaagaatca
aagtccttgtacagtacatctttatatcccgacaaacaacaggaccttcatttttctaat
gattctatgttggcaccaaattcttcttttacatcttatcctccacccggtggtagatct
cagcaggcttctccaagtcataatacaggccccttaaacattccatatcatgctgtagga
gctcagatggctctatctcctcaaaatcgttctcatttatccaattctgcactacagtta
ggtggattaaaccatggggcaccttttggtgggaacattcgtcagtttcctatgggttcc
cctcttaatcagcgaatgccgaatcacttggtcaaccaggcagggccatataatggagtt
catcccaatatttcttctggtttaccaatggtcaacaaatatgatcagatgctagggatg
atggaactgagggatcaaatgccaaaacccgctccaatgggtaggcagaatctccgattt
tctcctcagggttttgatgcgagtaaccataataaattcaataacggatggccccgattt
aggtctaggtatatgacgactgaggaacttgagaatatatttaggttgcagcttgcagca
acacatagtaatgatccatatgtagatgattattacaatcaaggttgtcttgcgaaaaaa
tcttcaggtgctaaattgaggcgtcacttttcaccagctcaaataagggaaatcccttta
cgagcttctgctaatgagccacatgcttttcttcaggttgatgctctagggagggttcca
ttctcatcaattcgcaggccccgtcctctactggaagttgatccaccaaattcttcacgt
gctgttggtcccgatcaaaacatatcagaaaagcctcttgaacaggagccaatgttggca
gcaagggtcttaattgaagacggtctttgtgttcttcttgatgtagatgatattgaccgt
ttcctacagtttaataagcagcttcaagataatggagatcatttaaaacgaaaaaggaag
ggtcttttggaaggactttcagcctcacttcaactagttgatccacttggaaagaatgga
catgcagttgaacttgctgcaaaagatgactttgtttttctcaggatagtttctctaccc
aaaggtcgaaaactacttgctaggtacctccaagtactttttccaggcggggagctaatg
cgaatagtctgcatgaccatctttcgtcatttaagattcttatttggcggtcttccctcc
gatccagctgcagcagaaactgtaattaaccttgcaaaggtggtctcaaaatgcatccgc
gaaatggatcttgtatcacttagtgtttgcctagcttcagttgtttgttcttctgagcct
ccgcctctacgcccccttggaagccctgctggagatgggacttcccttattttagcatca
gtgctggagagagctactgaacttttaacagatcctcatgctgctagcaactataacata
agaaatcgttcactttggcaggcttcatttgatgaattctttggccttctcaccaagtat
tgtgtcaataagtatgacagcatcatgcattcatttcttactcaaggaacaccgaatatg
gcgatcattgggcctgatgttgctagagctataagtagggaaatgcccgttgagctcttg
cgtgcaagtctacctcacactgatgatcgccagaaaaaaatattacttgattttgctcag
cgctctgtagttggatataatagtaattccgggggtaatggtcaccatgtaaactcataa

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