Vicia villosa (hairy vetch): 131625721
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Entry
131625721 CDS
T09680
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131625721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131625721
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131625721
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131625721
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131625721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH_2
zf-CCCH
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
131625721
NCBI-ProteinID:
XP_058752546
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MEDPEGVLSFDFEGGLDAPPSAATASASVAAAPSGPIVQPDSYLPPSAASNGAAAPSVAE
PVSGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCV
YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNYNNSHKF
AQQRGSSYTQQVEKSQFPQGINSANQGVAVKPLAAESGNVQQQQQVQQPQPQVSQNQAQN
LANGQPNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV
ENVILVFSVNRTRHFQGCAKMTSRIGGSVPGGNWKYAHGTAHYGRNFSVKWLKLCELSFH
KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYVEPDSELMAISVAAESKREEEKA
KGVNPENEGENPDIVPFEDNEEEEEEESDEEEESFGNGVGPVVQGRGRGRGMMWPPHMHL
GRGARPMPGMQGFNPVMMGDGLPYGPPGPDGFGMPDLFGMGPRGFGPYGPRFSGDFGGPP
AAMMFRGRPSQPGMFPGGGFGMMMNHGRGPFMGGMGVPGPNPPRGGRPVNMPPMFPPPPP
PPQNMNRIAKRDQRTSDRNDRYSSGPEQGRSQDMLSQSGGPDDDMQYQQGYKSQQDDKND
DSESEDEAPRRSRHGEGKKRKGEA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcccgagggagtcctcagcttcgatttcgagggcggtctcgacgcccctccc
tccgccgccaccgcatctgcctccgttgccgccgcaccttctggccctattgtccagcct
gattcctacttaccaccttccgcggcctccaatggtgccgccgctccttccgttgctgag
cctgtttctggtaacgttcctggacgacggagcttccggcaaacggtttgtaggcactgg
cttcggagtttgtgtatgaaaggtgatgcttgcgggtttttgcatcagtatgataaggct
cggatgccggtgtgcaggttttttagattgtatggagagtgtcgtgagcaggattgtgtt
tataagcatactaatgaagatatcaaggagtgtaacatgtacaagctaggattttgtcct
aacggacctgattgtcgatacaggcatgcgaagtctcctggacctccgcctccaattgaa
gaggtccttcagaagatccaacatttgtattcttacaattataacaattctcataaattt
gctcaacaaaggggttctagctatactcaacaagttgaaaagtctcagtttcctcaagga
atcaattctgcaaaccaaggtgtggctgtaaaaccattagctgcagagtcaggaaatgtc
cagcagcagcaacaagttcaacagcctcagccgcaagtcagccagaaccaagcgcaaaat
cttgctaatggccagcccaatcaagccaatcgaacatcaactcctttacctcaaggaata
tctaggtattttattgttaagagttgcaatcgtgaaaatttggagttatctgtacaacaa
ggagtatgggcaactcaacggagcaatgaatcaaaattaaatgaagcatttgactctgta
gaaaatgtgatattggttttctcagtcaaccgtactcgacatttccagggttgtgcaaag
atgacttccagaattggtggttctgttcctggggggaactggaaatatgctcatgggacg
gcacattatgggcggaatttctctgttaaatggttgaagttatgtgaactgtcattccat
aaaactcgccatttgagaaatccatacaatgagaacttaccagtgaagataagtagagat
tgtcaggagctggaaccctctatcggtgagcagttggcatccttgctttatgttgaacca
gatagcgaacttatggctatctcggttgcagctgagtctaaacgggaagaggagaaggca
aagggagtgaatccagagaatgaaggagaaaatccagatattgtcccatttgaagacaat
gaagaagaggaagaggaagaaagtgatgaagaggaggagagctttggtaatggtgtaggg
ccagttgttcaaggcagaggtaggggcagaggtatgatgtggccccctcacatgcatctc
ggacgcggagccagacccatgcctggaatgcaaggttttaaccctgtaatgatgggtgac
ggattaccctacgggcctcctggacctgatggttttggtatgccagatctttttggcatg
ggtccccgaggttttggtccatatggtcctaggttctctggtgattttggaggcccccca
gctgccatgatgttccgagggcgaccatcacaacctggcatgtttcctggtggtgggttt
gggatgatgatgaatcatggacgcggtccctttatggggggaatgggggttccaggtcca
aatccaccaagaggtggtaggccagtgaatatgcctccgatgtttccaccacctccgcct
ccaccacaaaatatgaaccgcattgccaagagagatcaaagaacaagtgatcgaaatgat
aggtacagttcaggaccagagcaaggtaggagtcaagacatgctcagtcaaagtgggggt
cctgatgatgacatgcagtatcagcaaggatacaagtcgcagcaggatgacaagaatgac
gatagtgaaagcgaagacgaggcgcctaggcggtcaagacacggagagggtaaaaaaaga
aaaggcgaagcttag
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integrated database retrieval system
