Vicia villosa (hairy vetch): 131626338
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Entry
131626338 CDS
T09680
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvo03036
]
131626338
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131626338
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
131626338
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
131626338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
PTM_DIR17_Tudor
ShkE_N
HEAT_GCN1_C
Xpo1
DUF4402
Motif
Other DBs
NCBI-GeneID:
131626338
NCBI-ProteinID:
XP_058753154
LinkDB
All DBs
Position
LG1:complement(1811887..1824898)
Genome browser
AA seq
1649 aa
AA seq
DB search
MAEKGYLQLKELGSKLEIVPSSKDSLVKLLKQATTCLAELDQSPLTTTRDSMNPFFNAIV
KPALLKHQDKDVKLLVATCISEITRITAPEAPYNDEILKDTFRLTVSTFSGLSDTSGASF
GRRVVILETLAKYRSCVVMLDLECDDLVYEIFSTFVAVARDDHPESVLSSMQTIMVVLLE
ESEDVREDLLSILLSTLGRGNKDVTMAARRLAMNVIQQCMGRLEPSIKQLLLSLMAGDSK
LVNNQIEYHGIIYDLYCCAPQILFGVLPYVTGELLTDQLETRLKAMNLVGDMISIPGTSI
PEAFQPIFSEFLKRLSDRVVEVRMSALEHVKNCLLLNPFRAEASQILSALCERLMDFDEN
VRKRVVAVICDVACHALNAIPLETVKLVAERLRDKSLLVKKYTMERLAEVFRVYCEKSCD
TANLNEYYWIPGKIVRCFYDKDFRSDIIESILCGSLFPVEFSISDIVKHWVGIFSGFDKV
EVKALEKILEQKQRLQQEMQKYLSIRQMHQEKDVPEVQKKIIFCFRVMSHLFADPIKAEE
SFQVLDQLKDANIWKILAALVDPNTSLHQARSYRENLLTILGVKHRLYEFLNTFSMKCSY
VLFNKEHVKEIFVQIVTQKSGENAQRTQSNMNLLVIIARFCPLLLNGSEEELVNLLKDNN
DIIKVGALNALAKAGATIRKQLSVKSSSVDLMLETLCLEGSRRQAKYAVHALGAITKDDG
LKSLSVLYKKLVNMLEEKTHLPAVLQSLGCIAQTAMPVFETRENEIKEFIINKILKSDGK
DHTRTSWGDKSDLCMLKIYGIKTLVKSYLPFNDAHVRMDIESLLDILRQMLSYGEISEDL
QSSPVDKAHLRLASAKAVIRLSRVWDQKIPVDLFYLTLRVSEINFPQAKKVFLDKVHQYV
KDRLLDAKYACAFLFNIFGSKPHEFAEAKQNLADIIQMHYQAKARQIPVQSDASSLTIYP
EYILPYLVHTLAHNSCPSVEECKDVGAYDNIYRQLHLILSILLQRDEGAKSEVTTNKEKE
IISTITSIFKSIKLSEDTVDTSKTKISHAICDLGLAITKRLVQKDVDLQELSHLVSLPPM
LYKAVEKKEGDDTMLVSEVKSWIVDDTALAHFESLELEMVQSQSAEDEASKDNEENEVPL
GVMLKQIKSQVINGKKVKKIRSVPAETEKLENDFSSLNTVRQINLDNLGSPNVEQCNGHE
HSLSKTTPEDPEHATGQKRKTSETTPAPVSKRSRSSSARGKLRLSTTTSKASRRVSGENS
PRAKLVLDADINTDTDSDMQKITLKDFLVSSLKQKVKGSESYHSDESNKHDEYDMKSHDD
LEQSEKTTSNNSKSSTRFSKKNKRKRTAGLTKCSMKKGEIDPEDLIGCRIKIWWPTDKKF
YGGTIKSYDCLKKKHVILYDDGDVEILRLDKERWNLLDKGRKSTKKIKRSSLATFRHKHK
GSPSKKKKKIVNDKQSPSKPVKPRKKNASKSDIHQEEAKETSESSNHEETMTSEAADEMN
SGGSEEELTSGSDEITTKGKKSNKKVRSVSRKKKLKKTKNFRNMEESDEDKQDYSERSSE
DRDSVPQYSSDERNADESTEALTENVDDEDESESEEDQDNNDVGDSPGETEKSHTEPSSP
DDASIAEIPDDAPLSKWKYRAGKKSSGKT
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagggttacctgcaactgaaggagctaggatccaagctcgaaatcgttcca
tcttccaaagactctctcgtcaagctcttgaagcaagcaaccacatgccttgctgagttg
gatcaatcacctttgactacaacacgggattcaatgaatcccttttttaatgcaattgtt
aagccggcattgttgaagcaccaagataaggatgtcaaacttctggttgcaacatgtatt
agtgagataactcggatcaccgcacctgaagctccttataatgatgaaattttaaaggat
acctttagattgactgtgagcacttttagtggtctaagtgatactagtggtgcatccttt
ggacggagagttgttatattggagactcttgcaaagtataggtcgtgtgttgtgatgttg
gaccttgaatgtgatgatttggtctatgaaatattcagtacttttgttgcggttgccaga
gatgatcatccagaaagtgtcctgtcatccatgcaaactataatggtggttctcttagaa
gaaagtgaggatgttcgtgaggatctgttatctattttactttctacattaggccgtgga
aataaagatgttactatggctgcaagaagacttgccatgaatgtcatacagcaatgcatg
ggaagacttgaacctagcattaaacaacttttgctatcgttaatggctggagatagcaag
ctagtgaacaatcaaattgaataccatggaattatctatgatctgtattgctgtgctcct
cagatcctatttggagttctcccttatgtgaccggagagctactgactgaccagttggaa
acccgtttgaaagcaatgaacctggttggcgatatgatttctattcctggaacttccatt
cctgaagcatttcagcctatattttcagaattcttgaagaggttgtctgatagagttgtt
gaggttcgcatgtctgcccttgagcatgtaaagaactgtctgctgttgaatccttttaga
gccgaagcttctcaaatattatctgccctttgcgaacggctgatggattttgatgaaaat
gttcgaaagcgtgttgtggctgttatatgtgatgtggcatgtcatgccctaaatgcaatt
ccacttgaaacggtgaaacttgtagcggaacggcttcgcgataaatctctacttgttaaa
aagtatactatggagaggttggctgaagtgtttagagtttattgtgagaaaagctgtgac
acagccaatctcaatgaatattactggattcctgggaagatcgttagatgtttctatgac
aaggatttcagatctgatataattgagtctattttatgtggatccctatttccagtagag
ttttcgattagtgatattgttaaacattgggttgggattttctctggatttgataaagtg
gaggtcaaggctcttgaaaagatattagagcagaaacaaaggttacagcaagagatgcaa
aagtatctgtctataagacagatgcatcaggaaaaagatgttcctgaggtccaaaaaaag
attattttctgtttcagagtaatgtcccatttgtttgctgaccccataaaggctgaagag
agtttccaggttcttgatcaattaaaagatgctaatatttggaagattttggcagctctt
gtcgatccaaatactagcctccatcaagcacgctcctatcgggagaatttgcttacaata
cttggcgtaaaacaccgtctctatgaatttctgaatacattctctatgaagtgctcctac
gtgcttttcaacaaggagcatgtaaaagaaatttttgtacaaatagtaactcaaaaatct
ggagagaatgctcagcgtacacagtctaacatgaatttattggtgataattgctcgtttc
tgtccattgcttcttaatggcagtgaggaggaactggtgaatctactgaaggataacaat
gatattattaaagtaggtgctcttaatgctttagccaaggccggtgctactattcgcaaa
caactttcagtaaagtcaagttcggtagatcttatgttggagacattatgtttagaaggt
agtcggaggcaggcaaagtatgctgtccatgcattgggtgcgataacaaaggatgacggc
ctcaagtcgctttctgttctatacaagaaactagtaaatatgctagaagaaaaaacacat
ctgcctgcagtactgcagtccctggggtgtatagcgcagactgcaatgcctgtttttgaa
actagagagaatgagattaaagaatttataataaacaagattctgaaaagcgatggtaaa
gatcacactagaacttcttggggtgataaaagcgatctttgtatgttgaagatatatggt
attaaaaccttagtaaagagctacctgcctttcaatgatgctcatgttcgtatggatatt
gagagtcttctggatatccttaggcagatgctatcctatggtgaaatatcagaagaccta
caatcaagtccagttgataaggctcatttgaggcttgcttccgcaaaggctgttattcgt
ttgtcaagggtttgggatcaaaagatacccgttgatcttttctacttaactttaagagta
tctgagataaactttcctcaagctaagaaggtttttttagacaaagttcaccaatatgtt
aaagaccgccttttggatgccaaatatgcttgtgctttcttattcaacatatttggatcc
aagccacatgaatttgcagaggctaaacagaatctggcagacattattcaaatgcactac
caggcgaaggcacgacaaattccagtgcaatcagatgcaagttctttgaccatttacccg
gaatacattcttccatacctcgttcatacacttgctcataactcatgtcccagtgttgag
gagtgcaaggatgttggagcatatgataatatataccggcagttgcacttgatactatca
atattacttcaacgagatgaaggtgccaaatcagaagtaaccactaacaaagaaaaagaa
attatatctactatcacttcaatctttaagagtatcaaactctccgaagacacggttgac
acttcaaagacaaagatttctcatgcaatatgtgaccttggcttagcaataactaaacga
ttagtgcagaaggatgttgatctgcaagagttgtcccatttggtgtctctacctccaatg
ctatacaaagcggttgagaagaaggaaggagatgacactatgctggtaagtgaagtgaaa
agctggattgtggacgataccgccttggctcactttgaatctcttgagctagaaatggtt
caatcccaatcagccgaggatgaagcttcaaaggataatgaagaaaacgaagtacctttg
ggagtgatgttgaagcaaatcaaatctcaggtaattaatggaaaaaaggtgaaaaagatt
aggtctgtgccagctgaaacagaaaagcttgaaaatgatttttctagcttgaatacggtc
agacaaatcaacttggataacttggggtcacctaatgttgaacaatgtaatggtcatgaa
cattctttaagtaagacaacaccagaggatccagagcatgctacaggtcaaaaaagaaaa
accagtgaaacaacacctgctccagtgtctaaacgtagtaggtcttcctctgctcgtggt
aaactgagattatcaactactacatcaaaggcatctcgaagagtttcaggggaaaactcc
cctcgagcaaagttagtgttggatgcagatattaacaccgatacagatagtgatatgcag
aaaataacgctcaaagacttcttagtgtcctcattaaaacaaaaagttaagggctcggaa
agttatcatagtgatgagtcgaataaacatgatgaatatgacatgaagagtcatgatgat
ttggaacaaagtgaaaagactacaagtaataattccaagtcatccacacgttttagtaag
aagaataaaagaaaaaggactgcaggattgacaaagtgctcaatgaagaaaggtgaaatt
gatcctgaagatctaattggttgcagaattaaaatttggtggcctacggacaagaaattt
tatggaggaactatcaagtcttatgattgtttaaaaaagaagcacgtgatattatatgat
gatggagatgtagaaatacttcgtttggacaaggagcgctggaatcttttggacaagggc
cgtaaatctactaagaagataaaacgctcatcacttgcaactttccggcacaaacacaag
ggttcaccaagtaaaaagaaaaagaaaatagttaatgataaacaatctccaagcaagcct
gtaaaacctagaaaaaaaaatgcatcaaaaagtgatatccatcaagaggaggccaaagag
acatccgagtcatcaaaccatgaagaaaccatgacttccgaagctgctgatgagatgaac
tcaggtggttcagaagaggaactgacatcagggtccgatgaaatcacaacaaaggggaag
aaatctaacaagaaagtgagatcagtttccagaaaaaagaagctcaaaaaaaccaaaaac
tttcgtaatatggaagaatcagacgaagacaaacaggactatagtgagaggagttctgaa
gatagagatagtgtcccgcaatatagctcagacgagaggaatgctgatgaatcaactgaa
gctttgacggaaaatgttgacgatgaagacgaatcggagtctgaagaggatcaagataac
aacgatgtgggtgatagtcctggagaaacagagaaatcacatacagagccatcaagtcct
gatgacgccagcattgcagagattcctgacgatgctcctctgagcaaatggaagtatcga
gcggggaagaaaagctcaggaaagacgtga
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integrated database retrieval system
